Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0759 ATGATTGTCGATCAACAATCGAACTTCAAGCATTTTTGCAAAATCTGCAAAAAGGGGTTTGGGTGTGGCAGAGCTTTAGGAGGGCACATGAGGGCTCATGGCATTGGGGACGAGAGCACGACAATGGATGAAGATGACCCAGCAAGTGACTGGGAAGAAAAGCTCCGGGGTGGCGGCGACGGCGACAGCGGGAATGTGCCTCCAACAAAAAAACGAATGTACGCCTTGAGGACGAACCCTAATCGGCTAAAGAGTTGCAGGGTATGTGAGAATTGTGGTAAAGAGTTTTTGTCTTGGAAGTCTTTCCTTGAACATGGCAAGTGCACCTCCGATGATGTCGATGAGTCCCTCGTCTCGTCGCCGGGCTCCGATGGCAACGATATGCCAAGCCGAAGAGGTTGTGGCTGGTCTAAGAGGAAGAGATCTTTGAGAGCTACCACCAGAGTGGGTAGCTTCAACCCTAATTGCTCATCCAACGAGGAAGAAGACCTTGCTAACTGTTTGATGATGTTGTCAAACGCTACCGTCATTCCTGACATCGCCGAGCCGGAGGAATCATGTGCCTCGGCTAGCAAAGATGACGAGCGAAGAAACTCTACAAGCTTTATGGCTCCAATGTCGTTTAGAGTCCCTTTAGATAACAAAGCCAAAGGGGTAGCCAAAGGTTTGTTCGAATGCAAAGCATGCAAGAAGGTGTTCAATTCTCATCAAGCATTGGGCGGCCATAGAGCCAGCCATAAAAAGGTCAAAGGTTGCTTCGCAGCTAGGCTTGACAACCTTGATGATGGAATTGGCGGCACCGCTGATGACGATGTAATAACCCATGAAGATCAATTTTTCCTAACAAAGTCAAATTCAACCACACGATTCGATCATGGCTCTAATGCTGCCTCATTGATGGTCTCTTCCTCCAAAAGGAAATCAAAAGTTCACGAGTGCTCAATATGTCATCGAGTTTTCTCATCGGGACAAGCGTTGGGAGGGCATAAGAGGTGTCATTGGATCACGTCAAATGCTCCGGATACCTCGACGTTGGCGAGGTTTCAACAATTTCAGGATCAAATGGAACATATGAATAATCAAATACCCAAGTTTGATGATTCAGAGCCGTTTGATCTGAAGCTCGATCTCAACCTTCCGGCTCCATCGTCCAACGTTGCTGGGAGGCGGGATGTGTCCACGGGAATTTTCTTGCAGTCATGGGTAGGAGAAGGAGTAAAGGAACACAAAGATAACAATAGTCAAAGCCACAATCATCGTCATCACCACCATCATCGTCTGGAATTAGACAAAGAGAATGATGAAGATTGCAAGAACAATAATAATATCAATACGTCCACCATACAAAATGTGGATGATGAAGCTGATAGTAAGGTGAAGTTAGCAAAACTTAGTGAACTAAAGGACATGAACATAGAAGGAAGTTCTTCGCCATGGCTACAAGTGGGAATCGGTTCAACAACTGATGTGGAAACTGACCCATAA 1485 0.4626 MIVDQQSNFKHFCKICKKGFGCGRALGGHMRAHGIGDESTTMDEDDPASDWEEKLRGGGDGDSGNVPPTKKRMYALRTNPNRLKSCRVCENCGKEFLSWKSFLEHGKCTSDDVDESLVSSPGSDGNDMPSRRGCGWSKRKRSLRATTRVGSFNPNCSSNEEEDLANCLMMLSNATVIPDIAEPEESCASASKDDERRNSTSFMAPMSFRVPLDNKAKGVAKGLFECKACKKVFNSHQALGGHRASHKKVKGCFAARLDNLDDGIGGTADDDVITHEDQFFLTKSNSTTRFDHGSNAASLMVSSSKRKSKVHECSICHRVFSSGQALGGHKRCHWITSNAPDTSTLARFQQFQDQMEHMNNQIPKFDDSEPFDLKLDLNLPAPSSNVAGRRDVSTGIFLQSWVGEGVKEHKDNNSQSHNHRHHHHHRLELDKENDEDCKNNNNINTSTIQNVDDEADSKVKLAKLSELKDMNIEGSSSPWLQVGIGSTTDVETDP 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0759 494 MobiDBLite consensus disorder prediction 475 494 - -
Dere12g0759 494 MobiDBLite consensus disorder prediction 35 69 - -
Dere12g0759 494 SUPERFAMILY beta-beta-alpha zinc fingers 11 106 IPR036236 -
Dere12g0759 494 SUPERFAMILY beta-beta-alpha zinc fingers 223 333 IPR036236 -
Dere12g0759 494 Pfam C2H2-type zinc finger 310 335 - -
Dere12g0759 494 Pfam C2H2-type zinc finger 224 248 - -
Dere12g0759 494 Pfam C2H2-type zinc finger 11 33 - -
Dere12g0759 494 ProSiteProfiles Zinc finger C2H2 type domain profile. 311 333 IPR013087 -
Dere12g0759 494 ProSitePatterns Zinc finger C2H2 type domain signature. 313 333 IPR013087 -
Dere12g0759 494 MobiDBLite consensus disorder prediction 113 137 - -
Dere12g0759 494 ProSitePatterns Zinc finger C2H2 type domain signature. 226 246 IPR013087 -
Dere12g0759 494 ProSiteProfiles Zinc finger C2H2 type domain profile. 224 251 IPR013087 -
Dere12g0759 494 ProSitePatterns Zinc finger C2H2 type domain signature. 13 33 IPR013087 -
Dere12g0759 494 Gene3D Classic Zinc Finger 9 108 - -
Dere12g0759 494 PANTHER OS02G0659100 PROTEIN 3 491 - -
Dere12g0759 494 MobiDBLite consensus disorder prediction 408 445 - -
Dere12g0759 494 Gene3D Classic Zinc Finger 222 333 - -
Dere12g0759 494 SMART c2h2final6 311 333 IPR013087 -
Dere12g0759 494 SMART c2h2final6 11 33 IPR013087 -
Dere12g0759 494 SMART c2h2final6 224 246 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0759 Dere-ChrDere12 14495732 14497216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0759 105 375 C2H2 Transcription Factor Family AT1G02040 36.727 1.01e-32 125