LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere12g0756	ATGGCTCTCATCACTCTTCAACTTCAACATGCATTCTCTTACTTTGTCTCTCTCTTAGCTTTCTTTTCCATTTTTCTGGCTGCCCCTTCCTCTTGCTTTGTCCCCAGAAAGCTTCTCAATGCTTCTTACTCCCCATCTGGTTCGGATTGGTCACCGGCTGAGGCCACCTGGTTGACTATAGCTAGAAAAAGCTTTAACATTTTCGCTTATTCTATGTCTCTTTATCTGTGTGAAGGAGGTGCGTGTGGGTATGGTAGTGCTGTGGAGCAACCTCCATTCTCTGCAATGATATCAGCTGGAGGCCCTCCTTTGTATGAATCAGGCAAAGGCTGTGGTGCTTGCTATGAGGTGAAGTGCACTGAGAATTCAGCCTGCTCCGGTAATCCGGTAAAAGTAGTAATCACTGACGAGTGCCCTGAGTGTGGCTCGAACCAGAAAGTTCACTTTGATTTGAGCGGCACTGCCTTCGGTGCCATGGCTGTTTCAGGTCAAGCTCAGAAGCTACGCGATGCTGGGATACTGCAGATTCAACACAGAAGAGTGGAATGCAACTATCGTGGCACGTCGTTGGCGTTCCACGTGGACGCGGGGTCGAACTCGAACTATTTCGCGTGCTTAATCGAGTACGAGGACGGAGACGGAGACCTGGCGAAGGTGGAAATGAAGGAAGCACCGGACTCTGCCACGTGGACGCCGATGCAGCAGTCGTGGGGCGCTGTGTGGAAGCTGGACGCGGGGTCTCCGTTGAAGGCGCCGTTCTCGCTGCGGCTGACGACGGTGGAGTCGGGCCAGACCCTTGTGGCTAACAACGTAATTCCGGCGGGGTGGACCCCTGGTCAGACTTACCGATCAGTTGTGAATTTTCAGACCTAG	873	0.5246	MALITLQLQHAFSYFVSLLAFFSIFLAAPSSCFVPRKLLNASYSPSGSDWSPAEATWLTIARKSFNIFAYSMSLYLCEGGACGYGSAVEQPPFSAMISAGGPPLYESGKGCGACYEVKCTENSACSGNPVKVVITDECPECGSNQKVHFDLSGTAFGAMAVSGQAQKLRDAGILQIQHRRVECNYRGTSLAFHVDAGSNSNYFACLIEYEDGDGDLAKVEMKEAPDSATWTPMQQSWGAVWKLDAGSPLKAPFSLRLTTVESGQTLVANNVIPAGWTPGQTYRSVVNFQT	290

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere12g0756	290	SUPERFAMILY	PHL pollen allergen	189	284	IPR036749	-
	Dere12g0756	290	SMART	dpbb_1	97	178	IPR007112	-
	Dere12g0756	290	PRINTS	Expansin/Lol pI family signature	49	64	IPR007118	GO:0005576
	Dere12g0756	290	PRINTS	Expansin/Lol pI family signature	171	187	IPR007118	GO:0005576
	Dere12g0756	290	PRINTS	Expansin/Lol pI family signature	230	244	IPR007118	GO:0005576
	Dere12g0756	290	PRINTS	Expansin/Lol pI family signature	270	284	IPR007118	GO:0005576
	Dere12g0756	290	PRINTS	Major pollen allergen Lol pI signature	160	175	IPR005795	GO:0005576\|GO:0019953
	Dere12g0756	290	PRINTS	Major pollen allergen Lol pI signature	192	207	IPR005795	GO:0005576\|GO:0019953
	Dere12g0756	290	PRINTS	Major pollen allergen Lol pI signature	208	223	IPR005795	GO:0005576\|GO:0019953
	Dere12g0756	290	PRINTS	Major pollen allergen Lol pI signature	119	129	IPR005795	GO:0005576\|GO:0019953

Showing 1 to 10 of 21 entries

Previous1 2 3Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere12g0756	Dere-ChrDere12	14373043	14375163	Wgd

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere12g0756	32	288	Expansin Gene Family	AT1G65680	58.755	4.28e-109	315

Showing 1 to 1 of 1 entries