Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0739 ATGGCACGCTTCACGAGGTCCTCCACACATCGCCTCCTGTATTCCCTCTACACTTCCCCCACCAAGGCGACGCCGTCGCCGTCGCCGTCTCCCGCCGCTTATCTTCTCGTCGGCACCTTCCACCTCCGCCAGTTTTCCGCTGGGAACCTTGCGCGGGCAAAGGAGGATAAGGAGCCATGGTGGAAGGAGTCGATGGAGAGGCTTCGCAACATTGGGATCTCGGCGCACATCGACTCTGGCAAGACCACGCTGACGGAAAGGATTCTGTTCTACACAGGGCGAATCCACGAGATTCATGAGGTTAGAGGTAAAGACGGGGTTGGTGCCAAGATGGATTCTATGGATTTGGAGAGGGAGAAGGGGATTACTATACAGTCGGCTGCTACTTACTGCTCTTGGAAGGACTATAAGATTAACATAATTGACACGCCTGGTCATGTTGATTTCACCATTGAGGTTGAGAGGGCATTGCGTGTCCTTGATGGTGCCATTCTTGTCCTTTGTAGTGTTGGGGGAGTGCAAAGTCAGTCCATTACTGTTGATCGGCAAATGAGAAGATATGAGGTTCCAAGACTTGCATTTATCAACAAACTAGATCGAATGGGAGCAGATCCTTGGAAAGTTTTGAATCAGGCAAGGTCAAAGCTTCGGCATCATAGTGCTGCAGTGCAAGTTCCAATCGGCTTGGAAGAAGATTTTAAGGGTCTTGTTGATCTTGTGCAGTTTAAGGCCTACTATTTTCATGGTTCCAATGGTGAAAAAGTTGTGACTGAGGAAGTACCTGCTGATATGGTGACCATGGTTGCAGAGAAAAGGCGTGAACTTATAGAAGTTGTGTCAGAAGTTGATGATAAACTTGCTGAAGCGTTTCTAAGTGATGAGCCCATATCATCTACTGATCTTGAGGAAGCAATTCGGAGGGCCACCATAGCACGGAAATTTGTGCCAGTATTCATGGGCAGTGCTTTCAAAAACAAGGGGGTACAGCCACTTTTGGATGGTGTACTTAATTATTTGCCATGTCCAGTTGAAGTTAGTAGTTATGCTCTGGATCAGACAAAGAAAGAGGAGAGGGTTGTGTTGTCTGGAACTCCTGATGGGCCACTTGTGGCATTGGCTTTTAAGTTGGAGGAAGGGCGGTTTGGTCAGTTAACATATTTAAGAATCTATGAAGGTGTCATTCGGAAAGGTGAATTTATTATTAACATAAACACTGGCAAGAAGCTTAAGGTTCCTCGCTTGGTTCGGATGCATTCAGACGAGATGGAGGACATTCAAGAGGCTCATGCTGGGCAAATAGTTGCTGTCTTTGGTGTTGATTGTGCATCAGGAGATACTTTTACTGATGGGTCAGTCAGATACACAATGACTTCTATGAATGTACCTGAGCCGGTGATGTCATTAGCCGTGCAGCCTGTTTCAAAAGATTCTGGAGGGCAATTTTCAAAAGCTTTGAATCGCTTCCAGAGAGAGGATCCTACTTTCCGTGTTGGCTTGGACCCAGAGAGTGGGCAGACCATCATTTCAGGAATGGGGGAACTGCATTTAGAAGTCTATGTTGAGCGCATTAGGAGAGAGTACAAGGTTGATGCCACTGTTGGAAAACCTCGTGTTAATTTTAGAGAGACTGTTACTCAGCGTGCTGACTTTGATTATTTACATAAGAAGCAAAGTGGAGGGCAAGGTCAATATGGTCGAGTAATTGGGTATATTGAACCACTTCCAGCTGGGTCACCTACTAAGTTTGAGTTTGAAAACATGCTTGTTGGGCAGGCTATACCATCTAATTTTATCCCAGCAATTGAGAAGGGTTTCAAAGAAGCCGCTAATTCGGGTTCTTTGATTGGACATCCTGTTGAAAATCTTCGGGTTGTCTTGACAGATGGTGCTGCTCATTCTGTTGATTCCAGTGAACTTGCATTTAAGTTAGCTTCTATCTACGCTTTTAGACAGTGCTATGCAGCTTCCAGACCAGTTATATTAGAACCTGTTATGCTTGTTGAGCTGAAAGTACCAACAGAATTTCAAGGAGCTGTTGCTGGTGACATCAACAAGAGAAAAGGTATGATTGTTGGAAATGACCAGGAAGGAGATGACTCTGTTATTACTGCCCATGTCCCTCTTAACAATATGTTTGGATACTCCACGGCATTACGATCAATGACACAGGGTAAAGGGGAATTCACAATGGAGTACAAAGAGCATTCGCCAGTTTCTCATGATGTACAGACTCAATTGATAAACACCTACAAGAGCACCAAGGCAGCTGAATAA 2274 0.4529 MARFTRSSTHRLLYSLYTSPTKATPSPSPSPAAYLLVGTFHLRQFSAGNLARAKEDKEPWWKESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGKDGVGAKMDSMDLEREKGITIQSAATYCSWKDYKINIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLNQARSKLRHHSAAVQVPIGLEEDFKGLVDLVQFKAYYFHGSNGEKVVTEEVPADMVTMVAEKRRELIEVVSEVDDKLAEAFLSDEPISSTDLEEAIRRATIARKFVPVFMGSAFKNKGVQPLLDGVLNYLPCPVEVSSYALDQTKKEERVVLSGTPDGPLVALAFKLEEGRFGQLTYLRIYEGVIRKGEFIININTGKKLKVPRLVRMHSDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVRYTMTSMNVPEPVMSLAVQPVSKDSGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLEVYVERIRREYKVDATVGKPRVNFRETVTQRADFDYLHKKQSGGQGQYGRVIGYIEPLPAGSPTKFEFENMLVGQAIPSNFIPAIEKGFKEAANSGSLIGHPVENLRVVLTDGAAHSVDSSELAFKLASIYAFRQCYAASRPVILEPVMLVELKVPTEFQGAVAGDINKRKGMIVGNDQEGDDSVITAHVPLNNMFGYSTALRSMTQGKGEFTMEYKEHSPVSHDVQTQLINTYKSTKAAE 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0739 757 Pfam Elongation factor G C-terminus 660 745 IPR000640 -
Dere12g0739 757 SUPERFAMILY Translation proteins 307 459 IPR009000 -
Dere12g0739 757 FunFam Elongation factor G, mitochondrial 351 464 - -
Dere12g0739 757 CDD EF-G 70 342 - -
Dere12g0739 757 NCBIfam small GTP-binding protein domain 68 240 IPR005225 GO:0005525
Dere12g0739 757 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 112 127 IPR031157 -
Dere12g0739 757 Hamap Elongation factor G [fusA]. 64 750 IPR004540 GO:0003746|GO:0005525|GO:0006414
Dere12g0739 757 Pfam Elongation factor Tu domain 2 382 448 IPR004161 GO:0005525
Dere12g0739 757 Pfam Elongation factor G, domain IV 536 656 IPR005517 GO:0005525
Dere12g0739 757 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 5 749 - -
Dere12g0739 757 FunFam Elongation factor G 542 678 - -
Dere12g0739 757 Gene3D - 542 747 IPR014721 -
Dere12g0739 757 FunFam Elongation factor G 663 733 - -
Dere12g0739 757 CDD EFG_III 462 537 IPR009022 -
Dere12g0739 757 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 66 343 IPR000795 GO:0003924|GO:0005525
Dere12g0739 757 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 340 IPR027417 -
Dere12g0739 757 Gene3D - 663 733 - -
Dere12g0739 757 Gene3D Elongation Factor G (Translational Gtpase), domain 3 468 541 - -
Dere12g0739 757 Pfam Elongation factor Tu GTP binding domain 67 340 IPR000795 GO:0003924|GO:0005525
Dere12g0739 757 Gene3D - 60 345 IPR027417 -
Dere12g0739 757 SMART EFG_C_a 659 746 IPR000640 -
Dere12g0739 757 FunFam Elongation factor G 465 541 - -
Dere12g0739 757 FunFam Elongation factor G, mitochondrial 59 346 - -
Dere12g0739 757 SMART EFG_IV_2 537 657 IPR005517 GO:0005525
Dere12g0739 757 Pfam Elongation Factor G, domain III 461 535 IPR041095 -
Dere12g0739 757 CDD mtEFG1_C 662 739 IPR035649 -
Dere12g0739 757 PRINTS GTP-binding elongation factor signature 70 83 IPR000795 GO:0003924|GO:0005525
Dere12g0739 757 PRINTS GTP-binding elongation factor signature 139 149 IPR000795 GO:0003924|GO:0005525
Dere12g0739 757 PRINTS GTP-binding elongation factor signature 155 166 IPR000795 GO:0003924|GO:0005525
Dere12g0739 757 PRINTS GTP-binding elongation factor signature 191 200 IPR000795 GO:0003924|GO:0005525
Dere12g0739 757 PRINTS GTP-binding elongation factor signature 119 127 IPR000795 GO:0003924|GO:0005525
Dere12g0739 757 CDD EFG_mtEFG1_IV 540 655 IPR005517 GO:0005525
Dere12g0739 757 SUPERFAMILY EF-G C-terminal domain-like 459 536 IPR035647 -
Dere12g0739 757 CDD mtEFG1_II_like 369 449 - -
Dere12g0739 757 Gene3D Translation factors 350 467 - -
Dere12g0739 757 NCBIfam elongation factor G 64 751 IPR004540 GO:0003746|GO:0005525|GO:0006414
Dere12g0739 757 SUPERFAMILY Ribosomal protein S5 domain 2-like 536 658 IPR020568 -
Dere12g0739 757 SUPERFAMILY EF-G C-terminal domain-like 662 754 IPR035647 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0739 Dere-ChrDere12 13802553 13816527 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0739 384 544 Eukaryotic Initiation Factors Gene Family AT3G22980 24.719 4.38e-09 58.2