Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0731 ATGGGATCATGTATAGCGGACACCATGGATCCCTTTAGAGGACAAGGAGGAATTCAGATGCTGTTAACTGCAGAACAAGAAGCCCAACACATTGTTTCCAATGCAAGAAACTTGAGAACGCAAAGATTGAAGCAGGCAAAAGAAGAAGCTGAAAGAGATGCAGCTCAGTACAGATCCCACATGGAAAATGAATACCAAAAGAATCTTTCGGAGACAAGTGGGAGCTCTGGATCTAATGTGAAAAGACTAGAGGAGGAGACAGAAGCTAAGATTAAGAATCTGAAAGTGTCATCTTCAAAGGTTTCCAAAGAAATTATTGACATGCTGCTCAAGTATGTTACCTATGTGAAAGTCTAA 357 0.4062 MGSCIADTMDPFRGQGGIQMLLTAEQEAQHIVSNARNLRTQRLKQAKEEAERDAAQYRSHMENEYQKNLSETSGSSGSNVKRLEEETEAKIKNLKVSSSKVSKEIIDMLLKYVTYVKV 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0731 118 Coils Coil 40 67 - -
Dere12g0731 118 MobiDBLite consensus disorder prediction 61 80 - -
Dere12g0731 118 Pfam Vacuolar (H+)-ATPase G subunit 15 117 IPR005124 GO:0016471|GO:0046961|GO:1902600
Dere12g0731 118 NCBIfam V-type ATPase subunit G 16 116 IPR005124 GO:0016471|GO:0046961|GO:1902600
Dere12g0731 118 FunFam V-type proton ATPase subunit G 11 118 - -
Dere12g0731 118 MobiDBLite consensus disorder prediction 43 83 - -
Dere12g0731 118 SUPERFAMILY F1F0 ATP synthase subunit B, membrane domain 19 64 IPR028987 -
Dere12g0731 118 Gene3D - 10 118 - -
Dere12g0731 118 MobiDBLite consensus disorder prediction 43 60 - -
Dere12g0731 118 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 9 117 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0731 Dere-ChrDere12 13543921 13544778 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0731 9 117 Primary Pumps ATPases(2) AT3G01390 57.798 2.34e-34 113