Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0683 ATGAGTCATAAGAGTGTATGCTCTCATCGCATTCCGGCCAGGCTCACCGGCGATGTTCCGCTTTGCTTCCAGAGTTCTTGCTCCGGGACAACGGAGAACAGCGACAGTGATATCTATGCTCTGTCTTTCTCATCGGAACAAACAACCGTTAATGCCGGCGCCGTGGAGGTTTTCAGTGCCGAAAGCGACCTGAGTGCGGCGGCGCGTGGGGGTTACGCTCCTGGGAGTGGGAGGATTTACTGGGGATTGAGGCGGAGGCCGTGGGGGAAATATGCAGCAGAGATTAGGGATCCGAAGAAGAACGGCGAGGGAGTGTGGCTTTCATCATTTGACTTGGAGCCATGGTCGCCGGAAACAAGTGCCGAGGATGAGGCATCGATAAAGATGAAGAAGAGGAAGAGCCCAGTGACAAGCATCTTGGACACATCCGAGTCAAATGATGAAAGCCGGGGGAAGGGGTTGAGGATGGGGCCCATGGCCAAGTATTTCCCCAAATCCAGGTTCAACATTTCCATGGATTGTTTAAAGAACCAAGGTCTAGATGACTAG 549 0.5319 MSHKSVCSHRIPARLTGDVPLCFQSSCSGTTENSDSDIYALSFSSEQTTVNAGAVEVFSAESDLSAAARGGYAPGSGRIYWGLRRRPWGKYAAEIRDPKKNGEGVWLSSFDLEPWSPETSAEDEASIKMKKRKSPVTSILDTSESNDESRGKGLRMGPMAKYFPKSRFNISMDCLKNQGLDD 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0683 182 PANTHER DNA-BINDING DOMAIN 51 130 IPR044808 GO:0003700|GO:0009873
Dere12g0683 182 Gene3D AP2/ERF domain 79 137 IPR036955 GO:0003700|GO:0006355
Dere12g0683 182 MobiDBLite consensus disorder prediction 123 137 - -
Dere12g0683 182 ProSiteProfiles AP2/ERF domain profile. 79 113 IPR001471 GO:0003700|GO:0006355
Dere12g0683 182 SMART rav1_2 79 146 IPR001471 GO:0003700|GO:0006355
Dere12g0683 182 SUPERFAMILY DNA-binding domain 79 112 IPR016177 GO:0003677
Dere12g0683 182 MobiDBLite consensus disorder prediction 116 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0683 Dere-ChrDere12 12034045 12037497 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0683 78 154 AP2-EREBP Transcription Factor Family AT5G61600 41.558 2.30e-13 64.3