Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0682 ATGGATTACAAGACCACCGTTGACTCCGACCTCGGTCTTCTCGAATCAATCCGAAGCTACCTTCTTGAGGACCACACCGATTCTCTCATGGCGTTTCCCGCCACACTCACCGGCGATGCTCCGGTCTGCTTCCAGAGTTCTTGCTCCGGGGCAACGAAGAACAACGACAGTGACGTAAACTCTCTGTCTTTCTCACAGGAACAAGCAATTACTAATGCCGGCACTGTGGAGGTTTGCGGTGCGGAAAGCGACCTGGGTTCGGTGGCGCGTGGCGGGTACGCGCAGGAGGGTGGGAGGAATTACAGGGGAGTGAGGCGCAGGCCGTGGGGGAAATATGCAGCGGAGATCAGGGATCCGAAGAAGAACGGCAAGAGAGTGTGGCTCGGGACCCATGAGACCGCTGAGGACGCGGCTTTGGCTTACGATCGAGCCGCTTTCGAGATGCGCGGCTCCAAAGCCAAGCTCAATTTTCCTCATCTTATTGGCTCCAATGTGTCGGAGCCGCCGAGAGTGACCGGAAAGCGGAGGGTTCCGGCGCCATGGTCGCCGGCAACGAGTTCGGAGGAGGAGGCGTCGATGAAGATGGAGCGGAGGAAGAGCCCGGTGAGAAGCATCTTGGACACGTCATCGGAGTCGAATGATGAGAGCCAATGGGATGGCTTGGGGGTGGGGCCCACGGAATTATATGAACAATTTAACTTCAACTTCAATAGTTTTTAG 720 0.5653 MDYKTTVDSDLGLLESIRSYLLEDHTDSLMAFPATLTGDAPVCFQSSCSGATKNNDSDVNSLSFSQEQAITNAGTVEVCGAESDLGSVARGGYAQEGGRNYRGVRRRPWGKYAAEIRDPKKNGKRVWLGTHETAEDAALAYDRAAFEMRGSKAKLNFPHLIGSNVSEPPRVTGKRRVPAPWSPATSSEEEASMKMERRKSPVRSILDTSSESNDESQWDGLGVGPTELYEQFNFNFNSF 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0682 239 FunFam Ethylene-responsive transcription factor 2 99 159 - -
Dere12g0682 239 SMART rav1_2 100 164 IPR001471 GO:0003700|GO:0006355
Dere12g0682 239 MobiDBLite consensus disorder prediction 190 204 - -
Dere12g0682 239 PRINTS Ethylene responsive element binding protein signature 140 160 IPR001471 GO:0003700|GO:0006355
Dere12g0682 239 PRINTS Ethylene responsive element binding protein signature 101 112 IPR001471 GO:0003700|GO:0006355
Dere12g0682 239 Gene3D AP2/ERF domain 99 159 IPR036955 GO:0003700|GO:0006355
Dere12g0682 239 PANTHER DNA-BINDING DOMAIN 68 198 IPR044808 GO:0003700|GO:0009873
Dere12g0682 239 SUPERFAMILY DNA-binding domain 100 159 IPR016177 GO:0003677
Dere12g0682 239 ProSiteProfiles AP2/ERF domain profile. 100 158 IPR001471 GO:0003700|GO:0006355
Dere12g0682 239 CDD AP2 100 160 IPR001471 GO:0003700|GO:0006355
Dere12g0682 239 MobiDBLite consensus disorder prediction 205 219 - -
Dere12g0682 239 MobiDBLite consensus disorder prediction 166 222 - -
Dere12g0682 239 Pfam AP2 domain 100 150 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0682 Dere-ChrDere12 12025539 12026258 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0682 89 180 AP2-EREBP Transcription Factor Family AT2G44840 72.043 1.73e-42 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere12g0682 AP2 1.6e-15 CL0081