Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0673 ATGTTGCCGGTCCTGGTTGAGGTATCAAATGCTCACACAACTGCTGCAAGAGAAGGTGCTCAAAGATCAAATGCAGAGGAGGCTTCAAGTGTGCGTGGAATTCTAGCAAGAGAAGTGAATCAGTTGTCAAGAGCACGGGATAGTCCTATCACGTGCCTGGCCTCCATAAGAGAAGTGGCTCAGTTGTCAAATGCACGGATAGTTTTGGTGAGAGAAGATATGGGATTTAATGCACTAGCCTCTCAAGAACCTATCTCCCCTGTACCTCTAAGAACATTGAAAGGAAAGACCTCTTTGCCTGATTCAGAAAAACTGATGGCAGATGTTGAAACGTTGAAGGAAAGCAGTGATTTATTTGAGGAGGTTGGTTCAAGTTCATTTGCCGGTGCCAGTCATCCCCCAGAACCTGTTAATACAGATCTGATGAGAACGGTTTATGTGCCAATAGGTGAAAACAAATCTGAGGTTGGATGCTTAATGAAGAGCTTATCTATGAAGGGTCCTTTCCTAGAAGATCTCTCAATTCGTGTTCCTACTAAAAAACCAAGCTCATCTGTTCTTTCTCCTGCAGAAAGTATAGTTGAAGAAACAAATGACTCATGTAACTTATCCTCACCGTTTTCAGGTCATCTTGCATCACAAAATACAGAGAACTCTCTTCTTCCTCCAGATTCTGAGGAGAAAGAATGTGTTTGGGATGCTTCTTTGCCTCCTAGTGGTAATGTCAGTCCACATATTAGTATTGATAGTACTGGTGTAATGAGCATTGCTAATAGTTGTGCAAGTACATATCGAAGTGATGCAATTACTAGTGATGGCATGCTTAGTATAGACAGAAATTGGGATAGTAATAAAGGGAGTCTGAGGGGGGATTCATTAGAGAGTGCAAAAACTAGTGCTAGTCGGGCAAGTGATAGCAGTGGCCTCAGTGATGACAGCAACTGGAGCAACATAACTGGTAGTGCCAATAAGCCTCACAAAGGAAATGATCCTTGTTGGAAGGCTATCCTTGCCATACGAGTACGGGATGGAATTTTGGGCATGAGTCATTTTAGGTTACTCAAACGACTTGGTTGTGGTGATATAGGAAGTGTTTATCTCTCAGAGTTGAGTGGAACTAGGTGTTACTTTGCTATGAAAGTTATGGACAAGGCATCCTTAGCAAGCAGAAAGAAGTTGACTAGGGCACAGACAGAAAGGGAGATATTGCAGCTTCTGGACCATCCATTTCTGCCTACTTTGTATACACATTTTGAGACTGACAGGTTCTCCTGTTTGGTAATGGAATACTGTCCTGGGGGTGATCTACACACTTTAAGGCAACGGCAGCCAGGGAAACATTTTTCAGAGTATGCTGCTCGTTTTTATGCCGCGGAAGTCCTCTTGGCAATTGAATATCTGCACATGCTTGGAGTTGTGTATAGAGACCTTAAACCTGAAAATGTACTGGTCCGAGATGATGGTCACATAATGCTCTCAGATTTCGACCTTTCTCTTAGATGTGCTGTTTCACCAACACTAATCAGAACTTCCTATGATAATGACCCTTCAAAACGGGCGGGTGGTGCATTCTGTGTCCAGCCTGCTTGTATTGAACCTTCATCAGTATGCATCCAACCTGCCTGTTTCATTCCTCGGCTTTTTCCTCAGAAAAACAAGAAGTCCCGGAAGCCTAGAGCTGAGCTTGGTTTGCTGGCCAGCACACTTCCGGAGCTTGTTGCAGAGCCTACTCAAGCTCGGTCTATGTCATATGTTGGAACTCATGAATACCTTGCCCCTGAAATAATTAAAGGAGAAGGCCATGGCAGTGCAGTGGATTGGTGGACATTTGGAATCTTCTTGCATGAGTTATTATACAGTAAAACCCCATTCAAAGGATCAGGAAACCGAGCTACACTGTTCAATGTGGTAGGCCAGCAGCTCCGGTTTCCAGAGTCTCCGGCAACCAGTTATGCCAGCCGGGATCTGATCCGGGGCTTGCTTGTGAAGGAGCCACAACACCGGCTTGGGGTGAAGAGGGGTGCAGCCGAGATCAAGCAGCACCCCTTCTTTGAAGGCGTTAACTGGGCATTGATTAGGTGCAGCACGCCACCAGAAGTGCCAAGACCCGTGGAATTTGAACTACCCGGGAAGTTTGGAGCTGTTGATGCTGCTAGTGTTGGCAGCAATAGTAAAAGGATGGTAGGTACTGACATGAAGTCTGGGGGTAAATATCTGGACTTTGAGTTCTTCTAG 2235 0.4501 MLPVLVEVSNAHTTAAREGAQRSNAEEASSVRGILAREVNQLSRARDSPITCLASIREVAQLSNARIVLVREDMGFNALASQEPISPVPLRTLKGKTSLPDSEKLMADVETLKESSDLFEEVGSSSFAGASHPPEPVNTDLMRTVYVPIGENKSEVGCLMKSLSMKGPFLEDLSIRVPTKKPSSSVLSPAESIVEETNDSCNLSSPFSGHLASQNTENSLLPPDSEEKECVWDASLPPSGNVSPHISIDSTGVMSIANSCASTYRSDAITSDGMLSIDRNWDSNKGSLRGDSLESAKTSASRASDSSGLSDDSNWSNITGSANKPHKGNDPCWKAILAIRVRDGILGMSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLAIEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRTSYDNDPSKRAGGAFCVQPACIEPSSVCIQPACFIPRLFPQKNKKSRKPRAELGLLASTLPELVAEPTQARSMSYVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYSKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRGLLVKEPQHRLGVKRGAAEIKQHPFFEGVNWALIRCSTPPEVPRPVEFELPGKFGAVDAASVGSNSKRMVGTDMKSGGKYLDFEFF 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0673 744 PANTHER FLIPPASE KINASE 1-RELATED 114 707 - -
Dere12g0673 744 CDD STKc_phototropin_like 349 703 - -
Dere12g0673 744 Gene3D Transferase(Phosphotransferase) domain 1 578 701 - -
Dere12g0673 744 SMART serkin_6 351 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g0673 744 FunFam serine/threonine-protein kinase D6PK-like 435 502 - -
Dere12g0673 744 FunFam serine/threonine-protein kinase D6PK-like 579 702 - -
Dere12g0673 744 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Dere12g0673 744 Pfam Protein kinase domain 352 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g0673 744 Pfam Protein kinase domain 581 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g0673 744 MobiDBLite consensus disorder prediction 204 236 - -
Dere12g0673 744 MobiDBLite consensus disorder prediction 287 324 - -
Dere12g0673 744 MobiDBLite consensus disorder prediction 287 327 - -
Dere12g0673 744 SUPERFAMILY Protein kinase-like (PK-like) 332 705 IPR011009 -
Dere12g0673 744 MobiDBLite consensus disorder prediction 204 221 - -
Dere12g0673 744 ProSiteProfiles Protein kinase domain profile. 351 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g0673 744 FunFam Serine/threonine-protein kinase D6PK-like 349 434 - -
Dere12g0673 744 Gene3D Phosphorylase Kinase; domain 1 349 434 - -
Dere12g0673 744 Gene3D Transferase(Phosphotransferase) domain 1 435 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0673 Dere-ChrDere12 11838998 11844121 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0673 12 744 AGC Kinase Gene Family AT2G44830 68.331 0.0 961
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Dere12g0673 Pkinase 2.3e-36 CL0016