Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0671 ATGGAGAGGGTTCCAGAGCCAAAGGCACTGCCTCGGATGTTGCCCATCCTGGTTGAGGTATCAAACACGCATACAACTGCTGCAAGAGAAGTTGCTCAAAGATCGAATGCAGAGGAGGCTTCAAGTGTGCGTGGAATTCTAGCAAGAGAAGTGAATCAATTATCAAGAGCACGGGATGGTCCTATTACACGCCTGGCCTCCATAAGAGAAGTGGCTCAGTTGTCAAATGCACGGATAGTTTTGGTGAGAGATGATATGGGATTTAATGCACTTGCCTCTCAAGAACCTATCTCCCCTGCACCTTTAAGAACATTGAAGGGAAAGGCCTCTTTGCCTGAATCAGAAGAACTGATGGCAGATGTTGAAACATTGAATGGAAGCAGTGATTCATTTGAGGAGGTTGGTTCAAGTTCATTTGCTGGTGCTAGTCATCCCCCAGAACCTGTTGATACAGATCTGATGAGAACAGTTTATGTGCCAATAGGTGAAAACAAATCTGAGGTTGGATGCTTAATGAAGAGCTTATCTATGAAGGGTCCTTTCTTAGAAGATCTCTCAATACGTGTTGCTACTAAAAAACCAAGCTCAGCTGTTCTTTCTCCTGCAGAAAGTATAGTTGAAGAACCAAATGATATTAGTAACTTATCCTCACCGTTTTCAGGTCATCTTGCTTCACAGAATACAGAAAACTCTCATTTTCCCCCAGATTCTGCTGAGAAAGAATGTGTTTGGGATGCTTCTTTGCCTCCAAGTGGCAATGTCAGTCCACATAGTAGTATTGATAGTACTGGTGTTGTTACAACAATGAGCATTGTCAATAGTTGTGCAAGTACATATCGGAGTGATGCAATTACCAGTGATGGCATGCTTAGCATAGACAGAAATTGGGATAGCAATAAAGGGAGTGTGAGGGGGGATTCACTAGAGAGCGCAAAAACTAGTGCTAGTCGAGCAAGTGACAGCAGTGGCCTTAGTGATGACAGCAGCTGGAGCAACATAACTGGTAGTGCCAATAAGCCTCACAAAGGAAATGATCCTAGGTGGAAGGCTATCCATGCCATCCGAGTACGGGATAGAATTTTGGGTATGAGTCATTTTAGGTTACTCAAACGACTTGGTTGTGGTGATATAGGAAGTGTTTATCTCTCAGAGCTGAGTGGAACTAGGTGCTACTTTGCTATGAAAGTTATGGACAAGGCATCCCTGGCAAGCAGAAAGAAGCTAACTAGGGCACAGACAGAAAGGGAGATATTGCAGCTTCTGGACCATCCTTTTCTGCCTACCTTGTATACACATTTTGAGACTGACAGGTTCTCCTGTTTGGTAATGGAATACTGTCCCGGGGGTGATCTACACACTTTAAGGCAACGGCAGCCAGGGAAACATTTCTCAGAGTATGCTGCACGCTTTTATGCTGCGGAGGTCCTCTTGGCAATTGAATATCTGCACATGCTTGGAGTTGTGTATAGAGACCTTAAACCTGAAAATGTACTGGTCCGAGATGATGGTCACATAATGCTCTCAGACTTCGATCTCTCTCTTAGATGTGCAGTTTCACCAACACTAATCAGAACTTCCTATGATAGTGACCCTTCAAAACGGGCTGGCGGTGCATTCTGTGTCCAGCCTGCTTGCATTGAACCTTCATCAGTATGCATCCAACCTGCCTGTTTTATTCCTCGGCTTTTTCCTCAGAAAAACAAGAAGTCACGGAAGCCCAGAGCTGAGCTTGGTTTGCCAGCCAGCGCGCTTCCAGAGCTTGTTGCGGAGCCTACTCAAGCTCGGTCTATGTCATTTGTCGGAACTCATGAATACCTTGCCCCTGAAATTATTAAAGGGGAAGGCCATGGCAGTGCGGTAGATTGGTGGACATTTGGAATCTTCTTGCATGAGTTATTATATGGTCAAACCCCATTCAAAGGATCCGGAAACCGAGCTACCCTTTTCAATGTGGTAGGCCAGCAGCTCCGATTTCCAGAAGCACCCGCAACCAGCTATGCCAGCCGGGATCTGATCCGGGGCTTGCTTGTGAAGGAGCCGCAACACCGGCTTGGGGTGAAGAGGGGCGCGGCTGAGATCAAGCAGCACCCCTTCTTTGAAGGCGTAAACTGGGCATTGATTAGGTGCAGCACACCACCAGAAGTGCCAAGATCGGTGGAAAGTGAACTATCCGGAAAGTTTGGAGCTGTCGATACTGCTGGTGTTGGCAGCAACAGTAAAAGGATGGTAGGAACGGACATGAAATCTGGGGGTAAATATCTGGACTTTGAATTCTTCTAG 2280 0.4614 MERVPEPKALPRMLPILVEVSNTHTTAAREVAQRSNAEEASSVRGILAREVNQLSRARDGPITRLASIREVAQLSNARIVLVRDDMGFNALASQEPISPAPLRTLKGKASLPESEELMADVETLNGSSDSFEEVGSSSFAGASHPPEPVDTDLMRTVYVPIGENKSEVGCLMKSLSMKGPFLEDLSIRVATKKPSSAVLSPAESIVEEPNDISNLSSPFSGHLASQNTENSHFPPDSAEKECVWDASLPPSGNVSPHSSIDSTGVVTTMSIVNSCASTYRSDAITSDGMLSIDRNWDSNKGSVRGDSLESAKTSASRASDSSGLSDDSSWSNITGSANKPHKGNDPRWKAIHAIRVRDRILGMSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLAIEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRTSYDSDPSKRAGGAFCVQPACIEPSSVCIQPACFIPRLFPQKNKKSRKPRAELGLPASALPELVAEPTQARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGQTPFKGSGNRATLFNVVGQQLRFPEAPATSYASRDLIRGLLVKEPQHRLGVKRGAAEIKQHPFFEGVNWALIRCSTPPEVPRSVESELSGKFGAVDTAGVGSNSKRMVGTDMKSGGKYLDFEFF 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0671 759 SMART serkin_6 366 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g0671 759 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Dere12g0671 759 PANTHER FLIPPASE KINASE 1-RELATED 122 721 - -
Dere12g0671 759 MobiDBLite consensus disorder prediction 127 148 - -
Dere12g0671 759 MobiDBLite consensus disorder prediction 217 233 - -
Dere12g0671 759 MobiDBLite consensus disorder prediction 217 261 - -
Dere12g0671 759 MobiDBLite consensus disorder prediction 301 344 - -
Dere12g0671 759 CDD STKc_phototropin_like 364 717 - -
Dere12g0671 759 MobiDBLite consensus disorder prediction 301 339 - -
Dere12g0671 759 Pfam Protein kinase domain 596 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g0671 759 Pfam Protein kinase domain 367 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g0671 759 FunFam serine/threonine-protein kinase D6PK-like 594 717 - -
Dere12g0671 759 FunFam serine/threonine-protein kinase D6PK-like 450 517 - -
Dere12g0671 759 Gene3D Transferase(Phosphotransferase) domain 1 594 717 - -
Dere12g0671 759 ProSiteProfiles Protein kinase domain profile. 366 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g0671 759 Gene3D Phosphorylase Kinase; domain 1 364 449 - -
Dere12g0671 759 Gene3D Transferase(Phosphotransferase) domain 1 450 518 - -
Dere12g0671 759 SUPERFAMILY Protein kinase-like (PK-like) 346 717 IPR011009 -
Dere12g0671 759 FunFam Serine/threonine-protein kinase D6PK-like 364 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0671 Dere-ChrDere12 11773668 11778759 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0671 1 759 AGC Kinase Gene Family AT2G44830 66.499 0.0 969
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Dere12g0671 Pkinase 2.3e-36 CL0016