Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0649 ATGGAAGGAGAGAGAGGTGTCCCGAATTATGAACTTCAGGTTTCGTTCTCAAACCCCCACCCTCAAGCCATCCACGAAATGGGTTTTGTCCAATTCGAAGAGAACCAAGTCCTCAGCTTCTTGGCTCCCTCTGCTCAATCACAATCTTCTCCGGCGCTCTCTCAACCGCAGAACGGAGGAGCCGCCGCTTCCGCCACCGCTGCAGCACCGGCTGCCAACACGAGCTCCGCCGCCGCTGCAACTTCCGTCGGGTTTAGCCGTAATGATCTTGTGACGAGCAGAACTTCATGGAACAACGACCAGGTGGGAACTCTGGATCCCAAGGCTGTCAATGATGAAAATTGCACTGGAAATGCGAGTGACGGCAACAATACATGGTGGAGGAGTGCAGCATCAGAGAAAAGCAAGGTGAAGGTGAGGAGGAAGCTGAGAGAGCCAAGGTTTTGTTTCCAAACAAGAAGTGATGTAGATGTACTTGATGATGGCTATAAGTGGAGGAAGTATGGCCAGAAAGTTGTCAAGAATAGCCTTCATCCAAGAAGTTACTACCGCTGCACTCATAGCAACTGTAGAGTGAAGAAGAGGGTTGAACGACTGTCAGAGGATTGTCGTATGGTTATTACCACTTACGAAGGTAGACACAACCACTCTCCTTGCGACGACTCAAATTCATCAGAGCATGAATGCTTCACCTCTTTCTAA 702 0.4972 MEGERGVPNYELQVSFSNPHPQAIHEMGFVQFEENQVLSFLAPSAQSQSSPALSQPQNGGAAASATAAAPAANTSSAAAATSVGFSRNDLVTSRTSWNNDQVGTLDPKAVNDENCTGNASDGNNTWWRSAASEKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0649 233 Gene3D WRKY domain 146 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere12g0649 233 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 55 220 IPR044810 GO:0003700
Dere12g0649 233 MobiDBLite consensus disorder prediction 97 122 - -
Dere12g0649 233 FunFam WRKY transcription factor 57 145 219 - -
Dere12g0649 233 SMART WRKY_cls 159 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere12g0649 233 ProSiteProfiles WRKY domain profile. 154 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere12g0649 233 SUPERFAMILY WRKY DNA-binding domain 151 217 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere12g0649 233 Pfam WRKY DNA -binding domain 160 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0649 Dere-ChrDere12 11232856 11239389 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0649 3 233 WRKY Transcription Factor Family AT2G44745 55.187 2.93e-72 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere12g0649 WRKY 1.5e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g0649 12 11232856 11239389 Dere12g0649 12 11232856 11239389 ECH