Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0621 ATGTATGGTGGTGACGAAGTATCGGCAATTGTGATTGACTTAGGCTCTCATACTTGCAAAGCGGGTTACGCTGGCGAAGATGCTCCCAAGGCTGTGTTTCCCTCTGTCGTTGGAGCAATTGATCAAATGGATGTTGATGAACCTGATAATACTGAAAAGAACTCTGCTTCTTCTGGGGATTCGAAAAACAATGCCAGAAATGTTGATTCTGACAAAGCCAAAGGAAAGCGCAAATTGTATGTAGGATCACAGTCCTTGGGATACCGCAGAGACCATATGGAGGTTTTGTCACCGTTAAAAGATGGAATCGTTGCTGACTGGGATATTGTTGACAGCATATGGGATCATGCTTTCAGGGAATGCCTACTGATCGACCCTAAAGAGCATCCAATGCTGCTTGCAGAACCTTCTTCTAACACTCAACAACAGAGAGAAAGGACAGCAGAGCTTATGTTTGAAAAGTACAAAGTACCTGCTTTGTTTTTGGCCAAGAATGCTGTTCTTACATCTTTTGCCTCAGGGCGTGCTACAGCATTAGTTGTTGATGGCGGTGGAGGATCAACTACTGTTGCACCTGTACATGATGGTTATGTTCTTCAAAAGGCTGTTGCAACTTCTCCTATTGGAGGAGAATTTCTCACAGACTGCTTGATGAAAAGTTTGGAAAGTAAAGGTGTTGTGATAAAACCCCGGTACTCCTTTAAGAGAAAGGAAATTCGGCCTGGAGAGTATCAGATTGTAGATCTTGATTTTCCAAATACAACTGAAAGCTACAAACTCTACTCCCAGAGGGTGATTGCTAGTGATATCAAGGAATGTGTGTGTCGAGCTCCAGATACTCCATATGATGAAAGTGCATACTCAAACATTCCGATGACCCCTTATGAGCTTCCTGATGGCCAGACAATTGAAATTGGAGCTGATAGATTCAAGATTCCAGATGTTCTATTTAATCCAACCCTGGTTCAGACAATTCCTGGCATGGAAAGTTTTGCAGAGATCGCTCCTTCAATTCGCGGTCTGCCACAGATGGTTATAGAGAGTATTAATAAGTGTGATGTGGACATCCGAAGAGAATTATTTAGTAGCATACTGCTTGCTGGTGGTACAGCTTCTATGCAACAACTGAAGGAACGCCTTGAGAAAGACTTGTTAGAGGAGTCCCCTCAAGCTGCTAGAGTAAAAGTATTGGCCAGTGGAAATGCAACTGAAAGGAGGTTCAGTGTTTGGATAGGTGGAAGTATATTGGCTTCCCTTGGCTCCTTCCAGCAAATGTGGTTCTCCAAGTCTGAGTATGAAGAACATGGAGCTTCTTATATCCAAAGAAAATGCCCATGA 1338 0.4312 MYGGDEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDVDEPDNTEKNSASSGDSKNNARNVDSDKAKGKRKLYVGSQSLGYRRDHMEVLSPLKDGIVADWDIVDSIWDHAFRECLLIDPKEHPMLLAEPSSNTQQQRERTAELMFEKYKVPALFLAKNAVLTSFASGRATALVVDGGGGSTTVAPVHDGYVLQKAVATSPIGGEFLTDCLMKSLESKGVVIKPRYSFKRKEIRPGEYQIVDLDFPNTTESYKLYSQRVIASDIKECVCRAPDTPYDESAYSNIPMTPYELPDGQTIEIGADRFKIPDVLFNPTLVQTIPGMESFAEIAPSIRGLPQMVIESINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVLASGNATERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRKCP 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0621 445 Gene3D - 1 183 - -
Dere12g0621 445 FunFam Actin-related protein 4 1 183 - -
Dere12g0621 445 MobiDBLite consensus disorder prediction 43 75 - -
Dere12g0621 445 SUPERFAMILY Actin-like ATPase domain 174 444 IPR043129 -
Dere12g0621 445 CDD NBD_sugar-kinase_HSP70_actin 97 204 - -
Dere12g0621 445 Gene3D - 390 445 - -
Dere12g0621 445 FunFam actin-related protein 4 387 445 - -
Dere12g0621 445 Gene3D - 184 384 - -
Dere12g0621 445 Gene3D Actin; Chain A, domain 4 210 323 - -
Dere12g0621 445 PANTHER ACTIN 9 438 IPR004000 -
Dere12g0621 445 SUPERFAMILY Actin-like ATPase domain 5 181 IPR043129 -
Dere12g0621 445 Pfam Actin 4 444 IPR004000 -
Dere12g0621 445 SMART actin_3 7 445 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0621 Dere-ChrDere12 10778581 10793293 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0621 1 444 Cytoskeleton Gene Families AT5G09810 36.913 1.23e-93 286