Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0618 ATGATGGGCATAGTACCAGTGCTTCTGGGAGGATTGTTAGTGTTGGTGTTTCACACTTTCATTGTCTTGCTTGTGAAGCCAAGACTGATCAGAGAAAAGGTTCGGAAGCAAGGGATTGATGGGCCTCATCCCCGGTTCTTGTTGGGAAATATTCCAGAAATCAAGAGGCTTAAAACCCAAGTTCAGTCAAACACTGAAGATAAAGCTGTTTCCATTTCTCATCGCTGGCCCTCCACTGTGTTCCCCCATTTGGAAAAATGGAGAAACCAATACGGGCCCATTTGTTTATATTCTAGTGGAAATATACAGTTGTTGATGATCACAGATATAGAGATGGTGAAGGAAGTCAGCCTGTACACCTCTTTGAATCTAGGGAAGCCTTCTTATCTATCCAAAGATCGTGGACCACTCTTGGGCCAAGGCATATTATCATCAAGTGGACCTGTATGGGCTCACCAAAGGAAGATAATTGCTCCGGAACTATACCTTGATAAGGTCAAGGGCATGGTTAACTTGATGGTGGAGTCCACAAATATAATGGTGAGGAATTGGGAGAGTAGACTTGACAGTGAGGGAGGAGTGGCTTCAGAGATCAAAGTTGATGATGATTTGCGAAGCTTGTCAGCAGATATAATTGCGAGAGCCTGCTTTGGGAGCAACTATGCTAAAGGACAAGAAATATTCACAAAGCTTAGAGATCTTCAAAAAGTCATGTCCAACACAACTGCTGGAATTCCAGGATTACGCTACTTGCCAATAAGAAGCAACAGAAAGATGTGGAAATTAGAGAAAGAGATCAACTCAATGATAACAAAGTGTGTAAAACAACGCCTCAAGGATGGTCATGGGCAGGATCTTCTGCAAATGATACTGGAGGGTGCAACAAAATATGAGGGTGGTGGTGATGGCCTCTTATCAAATCCCATGTCACATGACATGTTCATAATAGATAACTGCAAGAACATATTTTTCGCCGGACATGAGACAACGGCGATCACAGTGTCATGGGCCTTGATGTTATTAGCAGCACACCAAGATTGGCAGGATCGCTGTCGAGCTGAGGTGCTTAAAGTTTGTGGAAATGGCACTCTGGATGCAAGCATGCTTCGAAGCATGAAGACGTTAACCATGGTGATTCAGGAGACTCTGCGGCTTTACCCACCTGCAGCATTTGTTATAAGATCAGCCTTCCAAGACATCAAATTAAAAGGCATTTTAATTCCAAAAGGGATGAACATTCAGATTCCGATCCCAATATTACAGCAAGACCCTGAATTGTGGGGACCTGATGCCCACAAGTTCAACCCAGAAAGATTTACAAATGGGATCCTTGAGGCTTGTAAGACGCCTCAGGCTTATATGCCATTCGGAGTCGGAGCTCGTGTCTGCGCCGGCCAGCACCTAGCATTGACAGAACTGAAGGTGATTTTGTCACTTATTCTACTCAAGTTTCAATTTTCTCTCTCCTCAGGTTACCATCATTCCCCTGCTTTTAGACTGGTAATAGAACCTGGTGAGGGTGTCTCTCTTATAATAAGGAGACGGTAA 1548 0.4386 MMGIVPVLLGGLLVLVFHTFIVLLVKPRLIREKVRKQGIDGPHPRFLLGNIPEIKRLKTQVQSNTEDKAVSISHRWPSTVFPHLEKWRNQYGPICLYSSGNIQLLMITDIEMVKEVSLYTSLNLGKPSYLSKDRGPLLGQGILSSSGPVWAHQRKIIAPELYLDKVKGMVNLMVESTNIMVRNWESRLDSEGGVASEIKVDDDLRSLSADIIARACFGSNYAKGQEIFTKLRDLQKVMSNTTAGIPGLRYLPIRSNRKMWKLEKEINSMITKCVKQRLKDGHGQDLLQMILEGATKYEGGGDGLLSNPMSHDMFIIDNCKNIFFAGHETTAITVSWALMLLAAHQDWQDRCRAEVLKVCGNGTLDASMLRSMKTLTMVIQETLRLYPPAAFVIRSAFQDIKLKGILIPKGMNIQIPIPILQQDPELWGPDAHKFNPERFTNGILEACKTPQAYMPFGVGARVCAGQHLALTELKVILSLILLKFQFSLSSGYHHSPAFRLVIEPGEGVSLIIRRR 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0618 515 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0618 515 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0618 515 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0618 515 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0618 515 Pfam Cytochrome P450 83 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0618 515 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0618 515 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0618 515 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0618 515 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0618 515 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0618 515 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0618 515 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0618 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Dere12g0618 515 Gene3D Cytochrome P450 28 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0618 515 PANTHER CYTOCHROME P450 FAMILY MEMBER 27 504 - -
Dere12g0618 515 SUPERFAMILY Cytochrome P450 75 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0618 Dere-ChrDere12 10702853 10708434 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0618 112 508 Cytochrome P450 AT5G24900 47.783 6.92e-135 395