Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0611 ATGAAGTGCTTTTACTACTTTAGAGAAAAATCCAGGAGCAGAAGACAAAGATCAGCACCTGTGCTGAATGAGCAAGAGAAGTCCCAGTATTCAGGAGCTGATAGAATCTCCAAGTCTTCATGCTCAACAACCTCGACGCGTGGTATACCAGAATTGTATGAGGAGAGGGCTCAAAATTTGCGGGTTTTCTCTTTCTCAGAGCTCAGGCGTGCAACAAATGATTTCAATAGGCTTGTTAAGATAGGGGAAGGTGGATTTGGGAGTGTTTATAAAGGTTCAATTCAGCCACTTGATGGAAATGGGGATCCAATTTTAGTTGCCATCAAAAGGCTGAACAAAGATGGATTACAGGGTCACAAACAATGGTTGGCCGAAGTTCAGTTTCTTGGTGTTGTGGAGCACCCAAATCTTGTCAAACTCATTGGATATTGTGCTGTAGATGGCGAAAGAGGGATACAAAGACTACTTGTTTATGAATATATGCGAAATAAAAGCTTAGAACATCATCTTTTTAATAAGGCATATGATCCTCTTTCTTGGAGAACAAGACTTGAGATACTACTTGGAGCAGCTCAAGGATTAGCTTATCTGCATGAAGAATTAGAAGTTCAGGTAATATATCGAGATTTTAAATCATCAAATGTGTTATTGGATGAAAACTTTAGGCCAAAACTTTCTGATTTCGGACTTGCTAGGGAGGGACCTATAGCTGGCCATACTCATGTTTCAACTGCAGTGGTGGGTACATTTGGGTACGCTGCTCCAGACTACGTTAAGACAGGCCATCTCACTACTAAGAGCGATGTGTGGAGTTTTGGTGTTGTACTATATGAAGTTCTTACAGGCAAGCGTTCATTGGAGAGAAACCGGCCAAAAATGGAGCAGAAACTTTTGGAGTGGGTGAAACAATTCCCTGTTGATAGCAAAAGGTTCAGCTTGATAATGGATCCACGACTTGAAGGACAATATTCCATTAATGCTGGACGAGAAATTGCCAAGCTTGCTGACAATTGCCTTAGCATGAATGCAAAAGACAGGCCAACAATGAGTCAGGTGGTAGCGAGATTGAAGCAGATAATCCAATCTTCAGATGAAGAAAACCTCTCAGAGATAAGCATCGGCGTATCTGAAGCTGATTCACCTGACCCTGAAGAAAAGCCAAATCAATCAAGCCCCTCAGAATTGTGGAAAAAAAGGATGGCCCATCTTGCAAAGCTTAGTGAGCATGTTGATAGTACTAGTCGGAGAAGATTTATGTTCCTCCAGAAGGCTAAAGTCCCTTCATAG 1287 0.4172 MKCFYYFREKSRSRRQRSAPVLNEQEKSQYSGADRISKSSCSTTSTRGIPELYEERAQNLRVFSFSELRRATNDFNRLVKIGEGGFGSVYKGSIQPLDGNGDPILVAIKRLNKDGLQGHKQWLAEVQFLGVVEHPNLVKLIGYCAVDGERGIQRLLVYEYMRNKSLEHHLFNKAYDPLSWRTRLEILLGAAQGLAYLHEELEVQVIYRDFKSSNVLLDENFRPKLSDFGLAREGPIAGHTHVSTAVVGTFGYAAPDYVKTGHLTTKSDVWSFGVVLYEVLTGKRSLERNRPKMEQKLLEWVKQFPVDSKRFSLIMDPRLEGQYSINAGREIAKLADNCLSMNAKDRPTMSQVVARLKQIIQSSDEENLSEISIGVSEADSPDPEEKPNQSSPSELWKKRMAHLAKLSEHVDSTSRRRFMFLQKAKVPS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0611 428 Gene3D Transferase(Phosphotransferase) domain 1 161 378 - -
Dere12g0611 428 ProSitePatterns Protein kinases ATP-binding region signature. 81 109 IPR017441 GO:0005524
Dere12g0611 428 MobiDBLite consensus disorder prediction 375 397 - -
Dere12g0611 428 Gene3D Phosphorylase Kinase; domain 1 49 160 - -
Dere12g0611 428 PANTHER OS01G0588500 PROTEIN-RELATED 32 360 - -
Dere12g0611 428 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 161 370 - -
Dere12g0611 428 CDD STKc_IRAK 81 359 - -
Dere12g0611 428 ProSiteProfiles Protein kinase domain profile. 75 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g0611 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Dere12g0611 428 MobiDBLite consensus disorder prediction 11 47 - -
Dere12g0611 428 Pfam Protein kinase domain 76 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g0611 428 SUPERFAMILY Protein kinase-like (PK-like) 57 356 IPR011009 -
Dere12g0611 428 MobiDBLite consensus disorder prediction 22 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0611 Dere-ChrDere12 10557489 10562908 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0611 1 381 Glycoside Hydrolase AT3G07070 42.894 1.47e-94 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dere12g0611 Pkinase 6.3e-47 CL0016