Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0594 ATGGCGTTTGTGAGTTCTTCCATGTTGATAGTCCTTCTCATTTCGGCTTTGCCCTTCCACTGTTCTTCTTCTTCATCCTTCTCCCTGTCGGTGGAGAATCCAGAACACATTATAAAATCAAGAAACGGCATGTTCACTGCTGGGTTTTATGCCGTTGGTGAGAATGCCTATTCGTTTGCCATCTGGTTCACTGAACCTCAAGGCAAAAGCTTAACTGTCATTTGGATGGCAAATCGCGACGTACCCGTGAACGGAATCGGCTCAACGCTTACCCTCTATGACTCAGGTAATCTTGTATTAAATGATGCGGGTTTACTCGATGTTTGGGCCACCAACACCACCTCAAAAACCTCTTCACAATTGCTTCTAAACAATGACGGTAATCTGGTTCTACTTGAAGCTCATCATGCTATTCTGTGGCAAAGTTTTGATTTTCCAACAGATACACTTGTCCCCGGACAACTTCTCACTAGATTTACAAACCTCGTCTCTTCCAGAAGTCCGACTAACCGCTCCTCTGGTTTCTATAAGCTGTATTTCGACAATGATAATGTTCTTCGTCTTCTCTACGATGGCCCAGATCTTTCAAGTGTATACTGGCCAGCTCCCTGGCTTGTCAGCTGGCAGTCTGGAAGGTCCACCTACAATGCAAGTCGCTTTGCGTTTCTCGATATGTATGGTAATTTCAGTTCGACCGACGACCTTACTTTCATAACATCAGACTATGGTCCTGTGCTTCAGAGAAGATTGACCCTTGATTATGATGGTAATGTCCGAGTGTACAGTCGAACAAACTGGAGAGAAAAATGGTATATTTCATGGGCAGCCTATTCAGAACCTTGCAACATTCATGGAGTCTGTGGTGTCAACAGTTTATGCATCTATTATCCTCATTCTGGTAGAAAATGCTCTTGTTTTCCAGGTTACAGCGTCAAGAATCCAAGTGACTGGTCTTTGGGATGCGAGCCCAAGTTCCATTTATCTTGCAGCTCAAGGGAGTCTCGCTTTTTGCGCATAGGCTATGCCGATTCCTACGGCTACGACTATGGGGTCTTCCTAAATTACACCTATGATCAATGTAAGGATCTATGCTTGAAATTATGTAATTGCAAAGGCTTCCAATTTACGTTTGACCGGAACAGTGGTAAATATAATTGTTATCCAAAGACCCTTTTGCTGAATGGGCATCTTTCTCCTTTTTTCCAAGGAGCATTTTACTTGAGACTGCCTAAATCCAGCTCATTCGCTCTTGAAGAATCCGATATGAAGTGTAATCATGATAACTCTGTAAAGCTTGAGAGAGTGTATGCCTTAGGACATGACAAATTGTTAGTGAAGGTGTTTCTATGGTTAGTGTTAGCAATTGGAGCCTTTGAAATTGTATGCATCTTTCTAGTTTGGTGTCTGACACGGAAAAAGTCCAGTGCAGATCAGCACAGTTATCATCTTACTGCAACTGGATTCAGGAATTATAGCTACGCTGAGTTGAAAGAGGCAACAAGAGGCTTCAGTGAAGAGATAGGAAGGGGTGCTGGAGGCATTGTATATAAAGGTGTATTGTCAGATCAACGAGTTGCAGCAATCAAGAGACTCAACGAAGCTGACCAAGGAGAAAGTGAGTTTCTAGCTGAAGTCAACATAATTGGAAGGCTTAATCACATGAACCTAATTGACATGTGGGGGTATTGTGCAGAGGGAAAGCATAGGATGTTGGTGTATGAGTATATGGAGAAGGGTTCCTTGGCAGAAAATCTTGTGTCCAGCAACAACTCACTTGATTGGAGAAAGCGGTGTGATATCGCACTGGGAACTGCCAAAGCGCTTGCATATCTTCATGAAGAATGCTTGGAGTGGGTTTTGCATTGTGATATAAAGCCTCAAAACATACTTCTAGATTCAGATTATCAGCCCAAGGTGGCAGATTTTGGATTGTCTAAGCTACTGACCAGAAATGACCTCAACAACTCAAGATTCTCAAGAATTAGAGGAACTAGAGGTTATATGGCACCTGAGTGGCTTTTTAATTTGCCAATCACGTCCAAGGTGGATGTTTATAGCTATGGAATTGTAGTGCTGGAGTTGATAACAGGAAAAAGCCTGATGGTTGATGGAGTGGACTTACATCACGGAAGGTTAGCAACATGGGTGAGGGAGAAGAAGAACAGAGAATATAATGATATGACATCATGGGTGGAAGAAATCATTGATCCTAAGATTGAGGGAAATTATGACATAAATAAGATGGACATTTTGGCTAGACTGGCTTTGGATTGTGTTAATGAAGAGAAGGACGCAAGACCTACAATGAGTAACATAGTGGAGATGCTTCAAAGTCATGATACTGATCCTTAG 2352 0.4239 MAFVSSSMLIVLLISALPFHCSSSSSFSLSVENPEHIIKSRNGMFTAGFYAVGENAYSFAIWFTEPQGKSLTVIWMANRDVPVNGIGSTLTLYDSGNLVLNDAGLLDVWATNTTSKTSSQLLLNNDGNLVLLEAHHAILWQSFDFPTDTLVPGQLLTRFTNLVSSRSPTNRSSGFYKLYFDNDNVLRLLYDGPDLSSVYWPAPWLVSWQSGRSTYNASRFAFLDMYGNFSSTDDLTFITSDYGPVLQRRLTLDYDGNVRVYSRTNWREKWYISWAAYSEPCNIHGVCGVNSLCIYYPHSGRKCSCFPGYSVKNPSDWSLGCEPKFHLSCSSRESRFLRIGYADSYGYDYGVFLNYTYDQCKDLCLKLCNCKGFQFTFDRNSGKYNCYPKTLLLNGHLSPFFQGAFYLRLPKSSSFALEESDMKCNHDNSVKLERVYALGHDKLLVKVFLWLVLAIGAFEIVCIFLVWCLTRKKSSADQHSYHLTATGFRNYSYAELKEATRGFSEEIGRGAGGIVYKGVLSDQRVAAIKRLNEADQGESEFLAEVNIIGRLNHMNLIDMWGYCAEGKHRMLVYEYMEKGSLAENLVSSNNSLDWRKRCDIALGTAKALAYLHEECLEWVLHCDIKPQNILLDSDYQPKVADFGLSKLLTRNDLNNSRFSRIRGTRGYMAPEWLFNLPITSKVDVYSYGIVVLELITGKSLMVDGVDLHHGRLATWVREKKNREYNDMTSWVEEIIDPKIEGNYDINKMDILARLALDCVNEEKDARPTMSNIVEMLQSHDTDP 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0594 783 ProSiteProfiles Protein kinase domain profile. 501 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g0594 783 Gene3D Transferase(Phosphotransferase) domain 1 576 782 - -
Dere12g0594 783 SUPERFAMILY Protein kinase-like (PK-like) 477 777 IPR011009 -
Dere12g0594 783 PIRSF SRK 1 783 IPR024171 GO:0004674
Dere12g0594 783 ProSitePatterns Protein kinases ATP-binding region signature. 507 529 IPR017441 GO:0005524
Dere12g0594 783 Pfam Protein kinase domain 504 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g0594 783 Gene3D - 146 274 IPR036426 -
Dere12g0594 783 CDD B_lectin 40 146 IPR001480 -
Dere12g0594 783 ProSiteProfiles Bulb-type lectin domain profile. 22 144 IPR001480 -
Dere12g0594 783 CDD PAN_AP_plant 325 410 - -
Dere12g0594 783 Gene3D Phosphorylase Kinase; domain 1 466 575 - -
Dere12g0594 783 PANTHER OS07G0415500 PROTEIN 6 779 - -
Dere12g0594 783 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Dere12g0594 783 ProSiteProfiles EGF-like domain profile. 277 315 IPR000742 -
Dere12g0594 783 Gene3D - 29 145 IPR036426 -
Dere12g0594 783 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 202 IPR036426 -
Dere12g0594 783 SMART serkin_6 501 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g0594 783 CDD STKc_IRAK 507 777 - -
Dere12g0594 783 FunFam S-receptor-like serine/threonine-protein kinase 470 575 - -
Dere12g0594 783 Pfam S-locus glycoprotein domain 243 312 IPR000858 GO:0048544
Dere12g0594 783 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 576 782 - -
Dere12g0594 783 SMART blect_4 28 146 IPR001480 -
Dere12g0594 783 Pfam D-mannose binding lectin 72 157 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0594 Dere-ChrDere12 10275383 10277734 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0594 491 778 Trihelix Transcription Factor Family AT5G38560 40.404 8.30e-63 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dere12g0594 Pkinase 4.1e-52 CL0016