Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0531 ATGAGTTCTCAGTTTCAAAAAGCTGTGTACAAGAAACAACAAGAAGTTGAAGACCACGAAGATCAAGAAGTAGAAGACAACCACCTGCTACACCAATGCGAGACAATACCGTTGTCGTCGCCGCCGCCGTACGGGTTTCCGCTGCCGCCATGGCCCTCCCACGAGGAGAACGAGACCGAGAACGACGAAGTTGTGTATGCAGACAAGGTGAAAGTCCAGATATTTGACGTACAGTCCTACGAAGCCGGCGGCGGCATGAACTCTACGGCGGCGGCGCCGTTCTCGTGGCGGAAGCTGTGGCTGTTTACGGGGCCGGGGTTGCTGATGAGCGTGGCGTTTCTGGACCCTGGGAATCTGGAAGGCGATCTTCAGGCCGGAGCGGTGGGTGGGTACTCGTTGTTGTGGCTTCTGATGTGGACGACGATCATGGGGCTGCTGATACAGCTGCTGTCGGCGAGGCTGGGGGTGGCGACGGGGCGGCACCTGGCGGAGCTGTGCCGGGAGGAGTATACGAAGTGGGCGAGGCTGGTGCTGTACGTGATGGCGGAGATGGCGCTGATCGCTGCAGATATTCAAGAGGTGATTGGGAGTGCCATAGCCTTAAAGATTCTGAGTCATGGGGTTTTGCCCATTTGGGCGGGAGTGGTAATCACAGCCATGGATTGTTTTGTGTTCCTATTTCTTGAGAACTATGGAGTAAGGAAGCTGGAAGGTGTTTTTGCAGTGTTCATTGGAACTATGGCTCTTTCTTTTGCTTGGATGTTCCTTGATACCAAGCCAAGTGGAAAAGAACTTCTAATAGGTATTTTGGTGCCTAAAGTGAGCTCAAAAACACTTCGGCAAGCAGTGGAACTCATAGGCTGTGTGATAACCCCACACAACGTATTCCTCCATTCAGCTTTAGTACAATCAAGAAACATAGACACCAAAAACAGAGGCCAAGTCCAAGAGGCTCTAAACTACTACACCATCGAATCATCACTCGCACTTCTCATCACCTTCGTCATCAACCTCTCTGTGATGACAGTCTTCGCGAGAGTGTTCTATGGCACTGAACAAGCCACCTCCATTGGACTCGTGAACGCAGGCCATTACCTTCAAGAGAGGTATGGAGGAGGCTTCTTCCCCATTCTCTATATATGGGGTATTGGGCTGCTAGCTGCTGGACAAAGCAGTACAATCACAGGCACATATGCTGGACAGTTCATCACAGAGGGGTTTCTGAAGCTGAAGTTGAAGAAATGGCTTAGGGCTTTGATTACCAGAAGCTGTGCCATTGTGCCTACTATGATTGCTGCTATTGTGTTTAACACAAAAGAAGGGTCTTTGGACACCTTGAACGAGTGGCTCAATGTGCTTCAATCTATACAGATTCCTTTCGCACTTATTCCTCTTCTAACTTTGGTGTCCAAAGAGGAGGTCATGGGGACCTTCAGAATTGGACCTGTCGTGGAGAAAGTGGCTTGGACTGTGGCAGTGGTGGTAATTCTGGCTTATGGATATATGTTGCTAGATTTCTTCCTCTCAGAAGTGAAGGGACTGCTCTTTGGCTTTGTGGTCTTTCTTGGTGCAGCTGCTTGGTTATCATTCATTGCATATTTGGTTAAACATAGTGGTGCCATTTCTACTTTACTAGATAAATCGCCTAATTCCCAAGGCTTTTCTCTTGCTGGGAATTAA 1680 0.4929 MSSQFQKAVYKKQQEVEDHEDQEVEDNHLLHQCETIPLSSPPPYGFPLPPWPSHEENETENDEVVYADKVKVQIFDVQSYEAGGGMNSTAAAPFSWRKLWLFTGPGLLMSVAFLDPGNLEGDLQAGAVGGYSLLWLLMWTTIMGLLIQLLSARLGVATGRHLAELCREEYTKWARLVLYVMAEMALIAADIQEVIGSAIALKILSHGVLPIWAGVVITAMDCFVFLFLENYGVRKLEGVFAVFIGTMALSFAWMFLDTKPSGKELLIGILVPKVSSKTLRQAVELIGCVITPHNVFLHSALVQSRNIDTKNRGQVQEALNYYTIESSLALLITFVINLSVMTVFARVFYGTEQATSIGLVNAGHYLQERYGGGFFPILYIWGIGLLAAGQSSTITGTYAGQFITEGFLKLKLKKWLRALITRSCAIVPTMIAAIVFNTKEGSLDTLNEWLNVLQSIQIPFALIPLLTLVSKEEVMGTFRIGPVVEKVAWTVAVVVILAYGYMLLDFFLSEVKGLLFGFVVFLGAAAWLSFIAYLVKHSGAISTLLDKSPNSQGFSLAGN 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0531 559 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 97 475 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere12g0531 559 NCBIfam Nramp family divalent metal transporter 104 473 - -
Dere12g0531 559 MobiDBLite consensus disorder prediction 11 25 - -
Dere12g0531 559 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 84 536 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere12g0531 559 Hamap Divalent metal cation transporter MntH [mntH]. 87 507 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere12g0531 559 PRINTS Natural resistance-associated macrophage protein signature 233 254 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere12g0531 559 PRINTS Natural resistance-associated macrophage protein signature 282 305 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere12g0531 559 PRINTS Natural resistance-associated macrophage protein signature 451 470 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere12g0531 559 PRINTS Natural resistance-associated macrophage protein signature 417 434 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere12g0531 559 PRINTS Natural resistance-associated macrophage protein signature 208 227 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere12g0531 559 PRINTS Natural resistance-associated macrophage protein signature 178 204 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere12g0531 559 PRINTS Natural resistance-associated macrophage protein signature 389 408 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere12g0531 559 Pfam Natural resistance-associated macrophage protein 120 481 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere12g0531 559 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0531 Dere-ChrDere12 9023991 9028922 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0531 62 538 Inorganic Solute Cotransporters AT1G47240 72.746 0.0 717