Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0529 ATGCACACAATGCACACCTTCTTCTTCCTCCTTACCATCGTTCTGCTCGTTTCTTCCAAACCCTTTGTTTCTTCTTCCAGTCGCAGGATCCTCCACGAACCCTTTTTGCCATTGGACAATCTCCCTCCCACTCAGTCTCCAAATCTTCCTCCTCCTTCTTCACCTTCTCTTTCCCCCCCTCCTCTTTCGCCTTCACCTCCAAAGCCCAAGTTACCACTTTCCACAAATACCCCTAACCAGCCTTCTTTTTTCCCCACGTACCCTTCTCCTCCTCCTCCACCATCCCCTATAACCTTCGCTTCCTTCCCTGCTAACATCTCCTCCCTTGTCATTCCGCAAAGCCCCAAACCCAAACCTTCTTCTGGGAAGTTCGTTGGTGTTACCGTTGCTGCGGTCATCTCCGGCGTTGTTGTCGTCGGGATTGCCGCCTTCTTCTATTGCCGGCGGCGAAGATGGAACGGTTACTCTGATGATGAGAAGACTCTCAGAGCCGAGAGTCGTCTCAGGCTGTTTCCCGCCAATGCTGAAACCGGCAATGGAAGTCGGAAGGTTAGACATACGTCTTCCGCTAGCTCTGAGTTTCTTTATCTTGGTACTGTTGTTGACTCGCTCGGTGTCGTCGATGATCATGACCGTGCTGATTCTCGAACCAATGATCATGGTGGTGGTACTGCTTTGGACCCTCGCAGAATGGACTCGCCGGAGCTCCAACCGCTTCCGCCGCTAGCCCGGCAAGCTTCGCGGCGGCTGAATGGAGCAGAGCGTTATGATATGGGTTCAACTACAACGGCAGACGAAGACGAAGAGGAATTTTACTCTCCGAAAGGGTCCTTGGGTGGTCATGAGAGCTCAAGCGGTACTGGATCGGGTTCTCGGAGAGTGTTCGCAGCTATTTTAGGCGAAAATGTTGGTGGACGAAGCAATGAATCAAGTTCTAGTTCGTTTTCTTCTTCCTCATCGGGTTCGCCGGAACGGTCACATTCCGTTAGCCTTTCGCCTCCTGTTAGCTTAAGCCCCAAAAGATCGCAACCAAAATCACCGGAAACTACGGTGGTCCAAAGCACTTATTCGCCGCCACAGAGAAACCAAGTTGCATCGCCTGCGTTGTCTCCTGTTTACAATAATCAGTATGTGCAATCTTCTTCAACGTCATCGTTATCTTCAACACCGGATAACACTTTTGCTCGTGACGGCCAGTCTCCTTTGCTATCTCCACTCACCTTATCACCAAATAGAGCTTCGGAGACGAGCCCAAATGGGGGTGTGAGAAATGTGGGAAATTCTAATGCTTCATTACCAAGATTATCTAATGCAGCTTCAGGGGGAGAGGAGAAAAATGCACGTGCCTCACCAAGATTATCCAATGCTTCAGACCGAAGCAGGAACTCTGTGTCATCTTCAGCTTTTTCACTGCCATCATCACCGGAGAAAGTGATGGAGCAAAGTCTAGATCAGTCTCCAAGAATTTCTAGCTTTTCCGATCGGTATAGGCATTCTCCTCTGTCTCTGTCATCACGGCCATTGTCGCCAACCTTGCTTTCATCACCAGAAATGGAATTGAGCAAAATTTCAAGTCAAACATCTATTGAGAATATTTTTGGTCCAAATGGAGAATTTCCTTTTTCAAATCTCCAGCCACAGCGTAAACGATGGGAAATTCCTGTTCTCTCAACACCCATTGTTCAGCCTCCCGGAGTTTCAGCCCCTCCACCACCTCCTCCTCCTCCTCCGATGCCGGAACGACATCGGAAGCAGTGGGAAATTCCGGCTCCTTCAACATCCATTGATCAGCCCATTTTTAGGCCACCTGAACTCATACCACCTTCGAGGCCTTTTGTGATGCAAAACCCAACAATAAAGGTTCCTCCTGTTGAGTTGCCACCAAGCTCTCAAAATGCAGGGGCAATTGAAGAGAACCAGAAACCGAAGTTGAAGCCGCTGCATTGGGATAAAGTGAGAGCGAGTTCTGATCGTGAAATGGTGTGGGACCAGTTGAGATCGAGTTCTTTCAAATTGAATGAAGAAATGATTGAAACATTGTTTTTTGTGAACGCGCCAAATCAAAATCCAAATGATGCTACTCCACGCCCAGTTCTTCCCCAACAATGTCAGGAGGACAGAGTACTTGATCCTAAAAAGTCGCAAAATATTTCAATTTTGCTCAGGGCCCTTAATGTAACTATAGAAGAAGTTTGTGAAGCGCTCTTAGAAGGTAGTGCTGATACGCTTGGAGCAGAATTGCTTGAAAGCTTGTTGAAGATGGCACCAAGCAAGGAAGAAGAGCGCAAATTGAGGGAACACAAAGATGACTCACCAACAAAGCTTGGTCCTGCCGAGAAATTTCTGAAGGCCGTGCTTGATGTGCCTTTTGCATTTAAAAGGGTGGAAGCAATGCTGTACATAGCTAATTTCGATTCTGAGGTGGAGTATCTCAGGAAAGCTTTTGAAACTCTGGAGGTTGCATGTGAAGAGCTGAGAAACAGTAGAATGTTCTTGAAACTTCTAGAGGCTGTGCTTAAAACTGGGAACCGCATGAATGTGGGGACAAACCGTGGCGATGCACTTGCCTTCAAGCTTGATACACTTCTCAAGCTTGTTCACGTTAAAGGCGCGGACGGGAAAACTACGCTACTGCATTTTGTTGTACAGGAAATTATAAGAACTGAAGGTGCTCGTCTCTCAGGTACCAATCAGACTCCAAACACTACTTCAGTTGAAGATGCCAAGTGCAGGAAGCTTGGCCTACAAGTAGTATCTAGTCTGAGTTCAGAGCTAGCAAATGTAAAGAAGGCTGCAGCTATGGATTCGGAAGTGCTCAGCGGTGAAGTCTCCAAACTTTCTAAAGGGCTCGCGAACATTGCAGGGGTTGTGCGGTTACATGAATCAACCAAGGCAGATGAAAAAAGCCAGAAATTTTCAGAGGTGATGAACAGATTCATGAGAATGGCCGAAGAGGAGATTCTAAAAATTGAAGCCCAGGAAAGAGTTGCTCTGTCCCTTGTGAAGGAAATTACAGAGTACTTCCATGGAGACTTGGCAAAGGAAGAAGCTCATCCTTTCAGAATCTTCATGGTGGTAAGAGACTTTTTGATGGTTCTGGACCGAGTCTGCAAAGAAGTGGGTATGATAAACGAGCGAACCATGTTTAGTTCTTCCCATAAATTTCCAGTTCCACAACCCCCTCCTGGATTACATGGAAGGCGACAACACAACTCTTCTGATGATGACAATCCATCTCCATAG 3243 0.4724 MHTMHTFFFLLTIVLLVSSKPFVSSSSRRILHEPFLPLDNLPPTQSPNLPPPSSPSLSPPPLSPSPPKPKLPLSTNTPNQPSFFPTYPSPPPPPSPITFASFPANISSLVIPQSPKPKPSSGKFVGVTVAAVISGVVVVGIAAFFYCRRRRWNGYSDDEKTLRAESRLRLFPANAETGNGSRKVRHTSSASSEFLYLGTVVDSLGVVDDHDRADSRTNDHGGGTALDPRRMDSPELQPLPPLARQASRRLNGAERYDMGSTTTADEDEEEFYSPKGSLGGHESSSGTGSGSRRVFAAILGENVGGRSNESSSSSFSSSSSGSPERSHSVSLSPPVSLSPKRSQPKSPETTVVQSTYSPPQRNQVASPALSPVYNNQYVQSSSTSSLSSTPDNTFARDGQSPLLSPLTLSPNRASETSPNGGVRNVGNSNASLPRLSNAASGGEEKNARASPRLSNASDRSRNSVSSSAFSLPSSPEKVMEQSLDQSPRISSFSDRYRHSPLSLSSRPLSPTLLSSPEMELSKISSQTSIENIFGPNGEFPFSNLQPQRKRWEIPVLSTPIVQPPGVSAPPPPPPPPPMPERHRKQWEIPAPSTSIDQPIFRPPELIPPSRPFVMQNPTIKVPPVELPPSSQNAGAIEENQKPKLKPLHWDKVRASSDREMVWDQLRSSSFKLNEEMIETLFFVNAPNQNPNDATPRPVLPQQCQEDRVLDPKKSQNISILLRALNVTIEEVCEALLEGSADTLGAELLESLLKMAPSKEEERKLREHKDDSPTKLGPAEKFLKAVLDVPFAFKRVEAMLYIANFDSEVEYLRKAFETLEVACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDALAFKLDTLLKLVHVKGADGKTTLLHFVVQEIIRTEGARLSGTNQTPNTTSVEDAKCRKLGLQVVSSLSSELANVKKAAAMDSEVLSGEVSKLSKGLANIAGVVRLHESTKADEKSQKFSEVMNRFMRMAEEEILKIEAQERVALSLVKEITEYFHGDLAKEEAHPFRIFMVVRDFLMVLDRVCKEVGMINERTMFSSSHKFPVPQPPPGLHGRRQHNSSDDDNPSP 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0529 1080 Gene3D Formin, FH2 domain 635 1042 IPR042201 -
Dere12g0529 1080 MobiDBLite consensus disorder prediction 41 89 - -
Dere12g0529 1080 MobiDBLite consensus disorder prediction 210 226 - -
Dere12g0529 1080 Pfam Formin Homology 2 Domain 638 1032 IPR015425 -
Dere12g0529 1080 MobiDBLite consensus disorder prediction 304 436 - -
Dere12g0529 1080 MobiDBLite consensus disorder prediction 41 74 - -
Dere12g0529 1080 MobiDBLite consensus disorder prediction 450 516 - -
Dere12g0529 1080 MobiDBLite consensus disorder prediction 210 516 - -
Dere12g0529 1080 PANTHER FORMIN-RELATED 431 1074 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Dere12g0529 1080 SUPERFAMILY Formin homology 2 domain (FH2 domain) 569 1044 - -
Dere12g0529 1080 ProSiteProfiles Formin homology-2 (FH2) domain profile. 634 1059 IPR015425 -
Dere12g0529 1080 MobiDBLite consensus disorder prediction 1051 1080 - -
Dere12g0529 1080 SMART it6_source 634 1048 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0529 Dere-ChrDere12 8965386 8969697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0529 586 1069 FH2 protein (formin) Gene Family AT3G25500 72.065 0.0 702