Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0511 ATGAAAATGGAGGCATCGCCTCTCATTCCTCTGTCCGACAAGCTACCAGTTACCCTGCGATTAACTGGTCACTGGTATCGGACCCCAACTCTACTCTTGGATTTGGATACTGAGGTAGAAACTGTTCAAAGTTCTGCTTTGAAAATATCAGCAACATGTGAAGATAGATCCATTTCGGAACCATATGTTAGTATGGAGTTTGAGTCTGAAGAGGCTGCCAGGGACTTTTACAGTGAATATGCAAGACGGGAAGGGTTTGTCATGCGTCTTGATCGGTGCCATCGTTCGGAGGTTGACAGTAGAATCCTTTCTCGTCGTCTTTCATGTAATAAGCAAGGTTTTTATGTTAGAGCAAGAAATGGAACGAGGCCAGTTCGGAAACAACGAGTTAGCATAAGAGAAGGCTGTGAGGCTATGATGTTGGTTAAAGTAAACAAACATGGGAAATGGGTTGTTACTAAATTTGTAAAGGAACATTGTCATCCTCTACAAGTTTCTGGTTCTCCTTCGTATAAAACTTTGGAATCAAAGGATAGGAAGATTCAAGAGCTCACCAAGGAACTTCAGCATCAGGATCAACTATGTCAACTTTATCACCAGCTGTTACTTTCCCTTCTCAACAACGTCGAGGAGCAAACAGAAGTGTTATCAGGAAAACTTGAACTCGTCGTTAGCAATCTAAAACAACACGAGAGTGAAGCTCAAAATCCCCAGGACACTCACTAG 726 0.4242 MKMEASPLIPLSDKLPVTLRLTGHWYRTPTLLLDLDTEVETVQSSALKISATCEDRSISEPYVSMEFESEEAARDFYSEYARREGFVMRLDRCHRSEVDSRILSRRLSCNKQGFYVRARNGTRPVRKQRVSIREGCEAMMLVKVNKHGKWVVTKFVKEHCHPLQVSGSPSYKTLESKDRKIQELTKELQHQDQLCQLYHQLLLSLLNNVEEQTEVLSGKLELVVSNLKQHESEAQNPQDTH 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0511 241 Coils Coil 174 194 - -
Dere12g0511 241 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 43 234 - -
Dere12g0511 241 Pfam FAR1 DNA-binding domain 75 164 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0511 Dere-ChrDere12 8653757 8656838 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Dere12g0511 FAR1 5.7e-25 CL0274