Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0510 ATGGATTTTTTGATAGTGGATTTTGACAAGGGAAATGAGGCAGAACAAAGCTCTTTAGAAGTGAGTACTAGTATGCTTGATGGAGTTGAATTTCAAGAACCATATGTGGGCATGGAATTTGATTCTGAAGAAGATGCCAGGAAGTTTTATGTTGAATACGCCAGACGGGTAGGATTTGTTGTACGTATCATGCAACGTCGCCGTTCAGGAATTGATGGGAGGACTCTTGCCCGTCGACTTGGATGTAACAAACAAGGATTCTCTCCAAATAATAAGGGCACAATTGGACCAGAGAAAAAGCCAAGACCAAGTGCACGAGAAGGGTGCAAGGCAACAATTTTAGTAAAGATGGAAAAATCTGGAAAATGGGTTGTTACAAGATTTGTAAAGGATCACAATCATCCTCTAACTGTTACAGCAAATGGGTTCAGCACACCGGGTGATAAAGACAAGAAAATTGAAGAACTTACTATGGAATTAGAGCGCCAAGATCAACTTTGTGCAGCTTATAGAGAAAAACTACTCAGTTTCATGAATAATGTGGAGGAGCAAACACAGGAACTGTCAGAAAAAATTCAAGTTGTCATAGAAAATCTAAGGAAAGTTGAATCAGAAGTGCAAAATAATTCCTGGAATAGAAAGTCTTGGGGCTTAACCTGA 660 0.3939 MDFLIVDFDKGNEAEQSSLEVSTSMLDGVEFQEPYVGMEFDSEEDARKFYVEYARRVGFVVRIMQRRRSGIDGRTLARRLGCNKQGFSPNNKGTIGPEKKPRPSAREGCKATILVKMEKSGKWVVTRFVKDHNHPLTVTANGFSTPGDKDKKIEELTMELERQDQLCAAYREKLLSFMNNVEEQTQELSEKIQVVIENLRKVESEVQNNSWNRKSWGLT 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0510 219 Coils Coil 178 205 - -
Dere12g0510 219 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 12 205 - -
Dere12g0510 219 MobiDBLite consensus disorder prediction 82 106 - -
Dere12g0510 219 Coils Coil 153 173 - -
Dere12g0510 219 Pfam FAR1 DNA-binding domain 48 137 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0510 Dere-ChrDere12 8645692 8652379 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Dere12g0510 FAR1 8.5e-30 CL0274