Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0502 ATGGCTATGCCTAAGACATATTGTTTGGTCTTCTTTCTCTTACTTCACATTCTCTTGAGCTCTGTTTCAACCCAATCTGCCCCTGAAAGTGCTCTTGTTACAGAGCTTCCTGGCTTCAACGGCACTTTTCCTTCCAAGCACTATGCTGGATATGTAACAGTGGATGAAAGCCATGGAAGGAACCTGTATTACTACTTTGTTGCATCAGAAAGCAAACCTTCTGAGGATCCTGTGGTTCTGTGGCTTAATGGTGGACCAGGCTGCTCTAGCTTCGATGGCTTCATATATGAGCATGGCCCTTTCAATTTTGAAGCAGCAAAGGCTGAGGGAAATCTTCCCACACTGCACCTCAATCCTTACAGTTGGTCAAAGGTCTCAAACGTTATATATTTGGATTCTCCTGCTGGAGTGGGATTTTCTTACTCAAAGAATGAATCTGATTACAAAACTGGAGACCTAAAGACAGCCACAGACTCGCATACTTTTCTTCTCAAGTGGTTTGAACTTTTCCCTGAGTTCCTCCCCAACCCGCTCTTCATCTCTGGTGAGTCATATGCCGGAGTTTATGTGCCGACTCTTGCTCATGAAATTGTGAAAGGAATTGAAGCTGGTGCAAAGCCTAATCTGAATTTCAAGGGATATATGGTAGGAAATGGTGTTACTGATGAACAATTTGATGGCAATGCACTTGTTCCATTTGCTCATGGCATGGGTCTCATCTCTGATGATCTGTATGAGGAGGTTAGAGGCGAGTGCAATGGGAATTTTTATAAGCCAGTCGGTGAAGAATGTGCAGACAAGCTTGCAAAAGTTGATCAGGACGTTTCAGGGTTAAACATATATAATATTCTAGAACCATGCTTTCACGGCACAAGAACAGGGGAAAGTACTTCATGGAATATAAGGTTGCCATCGAGCTTCTTGCACTTGGGGGAGACAGAGAGACCATTACCTGTGAGAAAAAGGATGTTTGGTCGTGCTTGGCCCCTCAGAGCTCCTGTGAGAGATGGCTTTGTGCCAACTTGGCCACAACTTCTCAATTCCCTGAGTGTTCCATGCACGGATGATGAGATTGCAGCCTCATGGTTGAACGATAAATCAATTAGAAAGGCAATTCATACCGTAGAGGAAACTGTGGTGAGTAGTTGGGAGTTATGCACAGACAAAATTGAATACTATCATGACGCAGGCAGCATGATCAGGTACCACAGGAACTTAACTTCCAAAGGATATCGAGCACTTATATACAGTGGTGACCATGATATGTGTGTTCCATACACCGGAAGCGAAGCATGGACAAAATCAATGGGATACAAGATTGTCGACGAATGGAGGCCTTGGACATCCCATGGTCAAGTCGCCGGGTATACTCAAGGATATGACAAGAATCTAACTTTTATGACCATAAAGGGGGCTGGACACACTGTTCCAGAATATAAACCTCAAGAGTCTTTGGATTTCTATAAACGCTTCATCAAGGGGTTACCTCTCTGA 1494 0.4398 MAMPKTYCLVFFLLLHILLSSVSTQSAPESALVTELPGFNGTFPSKHYAGYVTVDESHGRNLYYYFVASESKPSEDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAAKAEGNLPTLHLNPYSWSKVSNVIYLDSPAGVGFSYSKNESDYKTGDLKTATDSHTFLLKWFELFPEFLPNPLFISGESYAGVYVPTLAHEIVKGIEAGAKPNLNFKGYMVGNGVTDEQFDGNALVPFAHGMGLISDDLYEEVRGECNGNFYKPVGEECADKLAKVDQDVSGLNIYNILEPCFHGTRTGESTSWNIRLPSSFLHLGETERPLPVRKRMFGRAWPLRAPVRDGFVPTWPQLLNSLSVPCTDDEIAASWLNDKSIRKAIHTVEETVVSSWELCTDKIEYYHDAGSMIRYHRNLTSKGYRALIYSGDHDMCVPYTGSEAWTKSMGYKIVDEWRPWTSHGQVAGYTQGYDKNLTFMTIKGAGHTVPEYKPQESLDFYKRFIKGLPL 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0502 497 Gene3D - 349 496 - -
Dere12g0502 497 Gene3D alpha/beta hydrolase 25 329 IPR029058 -
Dere12g0502 497 FunFam Carboxypeptidase 399 494 - -
Dere12g0502 497 Pfam Serine carboxypeptidase 37 494 IPR001563 GO:0004185|GO:0006508
Dere12g0502 497 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 481 IPR001563 GO:0004185|GO:0006508
Dere12g0502 497 SUPERFAMILY alpha/beta-Hydrolases 33 496 IPR029058 -
Dere12g0502 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Dere12g0502 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Dere12g0502 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Dere12g0502 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 464 477 IPR001563 GO:0004185|GO:0006508
Dere12g0502 497 FunFam Carboxypeptidase 352 496 - -
Dere12g0502 497 ProSitePatterns Serine carboxypeptidases, serine active site. 180 187 IPR018202 GO:0004185
Dere12g0502 497 FunFam Carboxypeptidase 26 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0502 Dere-ChrDere12 8459373 8464536 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0502 358 497 Calmodulin-binding Proteins AT2G22960 47.857 2.34e-40 142