Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere12g0475 | ATGGATGAGGATTTCGATATGCCCCCGCCGGAAGAGATGAACGAGGACTTCGATCTTCCCGATGAAAACCCCATTCTCAAGGTTGGAGAGGAGAAGGAGATCGGCAAGCAGGGCTTGAAGAAGAAGCTCCTCAAGGAAGGTGAAGGCTGGGACACCCCTGAAGTGGGCGATGAAGTTGAAGTTCATTACACGGGAACGTTGCTTGATGGGACCAAGTTCGATTCAAGCCGCGACAGGGGGACCCCTTTCAAGTTTACGCTCGGACAAGGGCAAGTAATTAAAGGGTGGGATGAGGGAATAAAAACCATGAAGAAAGGTGAAAATGCCATTTTCACCATCCCTCCTGAGCTAGCATATGGGGAATCTGGTTCCCCTGGAACAATTCCTCCCAATGCTACTCTTCAATTTGATGTTGAGCTGCTGTCTTGGACTAGTGTGAAGGACATAAGCAAGGATGGTGGCATATTTAAGAAGATACTTGTGGAGGGGGAGAAATTTGAGAACCCCAAGGATCCTGATGAAGTTTTAGTTAAATATGAAGCTCGGCTTGAAGATGGAACGCTTGTATCAAAATCTGATGGAGTGGAGTTCACAGTGAGAGAGGGTTATTTTTGTCCGGCGTTGTCCAAAGCTGTTAAAACCATGAAGAAGGGTGAGAAAGTGCTTTTAACTGTAAAGCCGCAATATGGCTTTGGTGAGAAGGGGAAGACTGCACAAGGTGATGAAGGTGCAGTTCCTCCAAATGCTACTTTGCAGATTACTCTTGAGTTAGTATCTTGGAAGACTGTTTCAGAAATAACTGATGATAAGAAGGTCATTAAGAAGATCCTCCAAGCAGGGGAAGGATATGAGCGTCCAAATGAGGGAGCTGTTGTGAATTTGAAATTGATTGGTAAACTGCAAGATGGCACTGTCTTCTTGAAGAAGGGCGATGATGAAGAGTTGTTTCAATTCAAAACAGATGAAGAGCAAGTCATTCATGGGCTTGATAGAGCAGTAATGACTATGAAGAAGGGTGAAGTAGCACTTTTGACTATTGCACCTGAGTATGCCTTTGGTTCATCCGAGTCCAAGCAGGAATTAGCTGTTATTCCGCCAAACTCAACTGTTTATTACGAAGTTGAGCTAGTATCATTCGAGAAGGAGAAGGAGTCATGGGACATGAACACAGAGGAGAAAATTGAAGCTGCTGGTAGGAAGAAAGAAGAAGGAAATGTGTTGTTTAAGAGTGGAAAGTATGCAAGAGCTTCTAAAAGATACGAGAAGGCTGTAAAGTACATAGAGTATGATTCCGCCTTTAGTGAAGAGGAGAAGAAGCAGGCCAAGGCATTGAAGGTAGCTTGCAATTTGAACAATGCGGCTTGCAAGCTGAAGTTAAAAGATTATAAAGAAGCAGAGAAATTGTGTACTAAGGTGCTGGAACTCGAAAGTAGAAACGTGAAGGCACTTTATAGAAGGGCCCAGGCCTATATCCAGCTGGCTGACTTAGATTTGGCTGAATTTGACATTAAGAAAGCTCTGGAGATTGACCCCGACAACAGGGAGGTCAAGCTGGAGTACAAGACTTTGAAGGAAAAGGTGAAGGAGTATAACAAAAAGGAGGCCAAATTTTATGGAAATATGTTTGCCAAGATGAATAAGCCGGAGTCACTCGACAATAGTAAACAAGCGACGAAGGATGCTGAACCTATGAGCATAGATAGCAAGGCATAA | 1713 | 0.439 | MDEDFDMPPPEEMNEDFDLPDENPILKVGEEKEIGKQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDGTKFDSSRDRGTPFKFTLGQGQVIKGWDEGIKTMKKGENAIFTIPPELAYGESGSPGTIPPNATLQFDVELLSWTSVKDISKDGGIFKKILVEGEKFENPKDPDEVLVKYEARLEDGTLVSKSDGVEFTVREGYFCPALSKAVKTMKKGEKVLLTVKPQYGFGEKGKTAQGDEGAVPPNATLQITLELVSWKTVSEITDDKKVIKKILQAGEGYERPNEGAVVNLKLIGKLQDGTVFLKKGDDEELFQFKTDEEQVIHGLDRAVMTMKKGEVALLTIAPEYAFGSSESKQELAVIPPNSTVYYEVELVSFEKEKESWDMNTEEKIEAAGRKKEEGNVLFKSGKYARASKRYEKAVKYIEYDSAFSEEEKKQAKALKVACNLNNAACKLKLKDYKEAEKLCTKVLELESRNVKALYRRAQAYIQLADLDLAEFDIKKALEIDPDNREVKLEYKTLKEKVKEYNKKEAKFYGNMFAKMNKPESLDNSKQATKDAEPMSIDSKA | 570 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere12g0475 | 570 | Gene3D | - | 262 | 381 | IPR046357 | GO:0003755 | |
Dere12g0475 | 570 | FunFam | Peptidylprolyl isomerase | 262 | 382 | - | - | |
Dere12g0475 | 570 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Dere12g0475 | 570 | FunFam | Peptidylprolyl isomerase | 385 | 540 | - | - | |
Dere12g0475 | 570 | Gene3D | - | 31 | 147 | IPR046357 | GO:0003755 | |
Dere12g0475 | 570 | Gene3D | - | 148 | 261 | IPR046357 | GO:0003755 | |
Dere12g0475 | 570 | MobiDBLite | consensus disorder prediction | 548 | 570 | - | - | |
Dere12g0475 | 570 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 289 | 380 | IPR001179 | GO:0003755 | |
Dere12g0475 | 570 | MobiDBLite | consensus disorder prediction | 1 | 19 | - | - | |
Dere12g0475 | 570 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 168 | 258 | IPR001179 | GO:0003755 | |
Dere12g0475 | 570 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 283 | 377 | IPR001179 | GO:0003755 | |
Dere12g0475 | 570 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 52 | 141 | IPR001179 | GO:0003755 | |
Dere12g0475 | 570 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 172 | 261 | IPR001179 | GO:0003755 | |
Dere12g0475 | 570 | SUPERFAMILY | TPR-like | 385 | 546 | IPR011990 | GO:0005515 | |
Dere12g0475 | 570 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 56 | 144 | IPR001179 | GO:0003755 | |
Dere12g0475 | 570 | Coils | Coil | 513 | 533 | - | - | |
Dere12g0475 | 570 | FunFam | Peptidylprolyl isomerase | 148 | 261 | - | - | |
Dere12g0475 | 570 | Pfam | Tetratricopeptide repeat | 480 | 513 | IPR001440 | GO:0005515 | |
Dere12g0475 | 570 | SMART | tpr_5 | 446 | 479 | IPR019734 | GO:0005515 | |
Dere12g0475 | 570 | SMART | tpr_5 | 480 | 513 | IPR019734 | GO:0005515 | |
Dere12g0475 | 570 | SMART | tpr_5 | 397 | 430 | IPR019734 | GO:0005515 | |
Dere12g0475 | 570 | Gene3D | Tetratricopeptide repeat domain | 383 | 540 | IPR011990 | GO:0005515 | |
Dere12g0475 | 570 | ProSiteProfiles | TPR repeat profile. | 480 | 513 | IPR019734 | GO:0005515 | |
Dere12g0475 | 570 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 11 | 147 | - | - | |
Dere12g0475 | 570 | SUPERFAMILY | FKBP-like | 34 | 152 | - | - | |
Dere12g0475 | 570 | SUPERFAMILY | FKBP-like | 264 | 397 | - | - | |
Dere12g0475 | 570 | SUPERFAMILY | FKBP-like | 149 | 264 | - | - | |
Dere12g0475 | 570 | FunFam | Peptidylprolyl isomerase | 29 | 147 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere12g0475 | Dere-ChrDere12 | 7973291 | 7977885 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere12g0475 | 16 | 570 | Calmodulin-binding Proteins | AT5G48570 | 80.143 | 0.0 | 887 |