Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0473 ATGCCCCTGCCGGAAGAGATGAACGAGGACTTCGATCTTCCCGATGAAAACCCCAGTCTCAAGGTTGGAGAGGAGAAGGAGATCGGCAAGCAGGGCTTGAAGAAGAAGCTCCTCAAGGAAGGTGAAGGGTGGGACACCCCTGAAGTGGGCGATAAAGTTGAAGTTCATTACACGGGAACGTTGCTTGATGGGACCAAGATCGATTCAAGCCGCGACAGGAGGACCCCTTTCAAGTTTATGCTCGGACGAGGATATGCCAAGACTACTTCTTGTGATGATGGAAAGAATTTTGAAATGTTGGTCATTAACATTTCAAAGTGCAATGTTTTACAAATGCTATAG 342 0.4737 MPLPEEMNEDFDLPDENPSLKVGEEKEIGKQGLKKKLLKEGEGWDTPEVGDKVEVHYTGTLLDGTKIDSSRDRRTPFKFMLGRGYAKTTSCDDGKNFEMLVINISKCNVLQML 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0473 113 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 46 84 IPR001179 GO:0003755
Dere12g0473 113 Gene3D - 23 112 IPR046357 GO:0003755
Dere12g0473 113 MobiDBLite consensus disorder prediction 1 26 - -
Dere12g0473 113 SUPERFAMILY FKBP-like 28 85 - -
Dere12g0473 113 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 50 113 IPR001179 GO:0003755
Dere12g0473 113 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 16 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0473 Dere-ChrDere12 7943838 7944860 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0473 10 86 Calmodulin-binding Proteins AT5G48570 74.026 9.80e-32 115