Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0472 ATGAGTTTGATCAAATCCATGAATGCAGCAGCTATTTTTCTCTTATTCCTTAACGTTTCGATCTTAGTCTCTGCAAAGAAGTCCGGTGATGTAACAGAATTACAGATTGGTGTTAAGTATAAACCAGATTCATGTGACCTTAAAGCACATAAAGAGGATCTACTCACAGTAAACTATCAGGGAAAACTCACTGATGGAACTGTTTTTGATTCAAACTTTGAAAAAAATAAGCCAATTCAATTTCAGGTTGGTATTGGTCAAGTGATCAAAGGGTGGGACCAAGGATTATTGGGAATGTGTGTTGGTGAGAAGCGGAGGTTGAAGATACCACCAGAACTTGGCTATGGAGAAGAGGGTTCTCCACCTACTATTCCTGGTGGTGCAACGCTAATTTTTGACACTGAGCTTGTAGCAGTAAATGGGAGAACTTCCAAGTGA 438 0.3973 MSLIKSMNAAAIFLLFLNVSILVSAKKSGDVTELQIGVKYKPDSCDLKAHKEDLLTVNYQGKLTDGTVFDSNFEKNKPIQFQVGIGQVIKGWDQGLLGMCVGEKRRLKIPPELGYGEEGSPPTIPGGATLIFDTELVAVNGRTSK 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0472 145 Gene3D - 20 140 IPR046357 GO:0003755
Dere12g0472 145 FunFam Peptidyl-prolyl cis-trans isomerase 26 141 - -
Dere12g0472 145 SUPERFAMILY FKBP-like 39 140 - -
Dere12g0472 145 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 48 137 IPR001179 GO:0003755
Dere12g0472 145 PANTHER PEPTIDYLPROLYL ISOMERASE 10 142 IPR044609 GO:0000413|GO:0003755|GO:0061077
Dere12g0472 145 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 52 140 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0472 Dere-ChrDere12 7933935 7938751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0472 53 138 Calmodulin-binding Proteins AT5G48570 55.814 1.20e-25 99.4