Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0470 ATGTCTACCTCCCGAAGGCTTTCCATCGCTGGATCATCGGTAAAAGATGATGAGAGCCTTGCGAGCTCCCCTGCAGTTCCAAGTTACATGGTGCCAACTCAGTCTATAAAAGCCAAGTCCAAGGCACAGAGTTCGTTAGCCGTAGAGAATGGAACAATAGAGAAGGCATCCTCAGGGATAGCGAAGAAACGACTTTCCTTCCCTCCTCCATTAGCCAGGCTAAGACGATATTTAGATCTACCAAAGGTGGAAAGCAGCTTCAGTGCAGAGGTCATCGTCAGTAATGGTGTAGCTGACAACAACTACTATAGGAACATACTAGACAGCAAGGGCTTGCTCCTAGTGGATCACCAGTTAGCCTATGATAAGAGGACCAAGCCTTATGTGAAGAAGATGGCCAAAAGCCAGGACTATTTCTACAAAGAGTTCTCTAGAGCCATCACTATCTTGTCTGAAAGCAGCCCTCTCACTAGCTCAAAGGGTGAGATCGAGGCAATGCACTACACAAATGCTTGCGAATCAATGGTGGTGTATGCTCCTGTGGACATCACTCGCATGCAATCTGTGATCATAGGCTGTGACTCGAGCAACGTCCCCATTCTGCCCTCAGGATTCTCCATTCTCCCTGACGGACTTGAGGCAATAAAGCCATTGGTGATCATTTTGAGGCAAGAAGAGAGAAGCACAAAGAAGGAGTGA 699 0.475 MSTSRRLSIAGSSVKDDESLASSPAVPSYMVPTQSIKAKSKAQSSLAVENGTIEKASSGIAKKRLSFPPPLARLRRYLDLPKVESSFSAEVIVSNGVADNNYYRNILDSKGLLLVDHQLAYDKRTKPYVKKMAKSQDYFYKEFSRAITILSESSPLTSSKGEIEAMHYTNACESMVVYAPVDITRMQSVIIGCDSSNVPILPSGFSILPDGLEAIKPLVIILRQEERSTKKE 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0470 232 MobiDBLite consensus disorder prediction 1 26 - -
Dere12g0470 232 Pfam Peroxidase 94 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere12g0470 232 Pfam Protein of unknown function (DUF4005) 19 68 IPR025064 -
Dere12g0470 232 PANTHER - 93 165 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere12g0470 232 SUPERFAMILY Heme-dependent peroxidases 84 164 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere12g0470 232 Gene3D - 151 164 - -
Dere12g0470 232 ProSiteProfiles Plant heme peroxidase family profile. 45 163 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere12g0470 232 Gene3D Peroxidase, domain 2 91 150 - -
Dere12g0470 232 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0470 Dere-ChrDere12 7905993 7907106 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0470 97 163 Peroxidase AT4G21960 80.597 1.36e-32 119