Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0457 ATGGCTACCAATTTCTGGACATCTTCTCATTATAAGCAGCTTGTAGACCAAGAAGATGTGGATATGGTGAATCCACTTGACAAAGAAAAGGGTGTCACACTTGAGGATTTTAAGCTGATAAAGATGCACATGGCCAGTTATATCTCAAAATTGGCTCAAAATGTTAAAGTTAGGCAGAGGGTTGTTGCTACAGCAGTTACGTACATGAGGCGTGTTTACACCAGAAAGAGTCTGACTGAATACGATCCTCGTCTGGTGGCTCCAACCTGCTTGTACCTGGCATCAAAAGCAGAAGAAAGCACAGTGCAGGCTAGGTTGCTTGTTTTTTACATTAAAAAACTATATGCTGATGACAAGTACAGGTTTGAGATCAAGGACATACTTGAAATGGAAATGAAGATTTTAGAAGCGCTTAACTATTACCTGGTTGTATTCCACCCTTACCGTTCATTGTCTCAGTTGCTCCAGGATGCAGGGTTGAATGATATAAACATGACTCAAGTAACATGGGGACTTGTAAATGACACCTACAAGATGGACCTAATTCTTGTACATCCTCCACATCTGATTGCTTTAGCATGCATATACATTGCTAGTGTGCTCAGGGAGAAAGACACCACTATTTGGTTTGAAGAACTTCGTGTTGATATGAATGTGGTAAAAAATATATCAATGGAGATACTTGATTTCTACGAAAGCCAGCGAATAATCACAGACGAGAGAATCAATGCTGCTTTCAACAAGCTAGGCGCGAGGTCTTAA 762 0.4042 MATNFWTSSHYKQLVDQEDVDMVNPLDKEKGVTLEDFKLIKMHMASYISKLAQNVKVRQRVVATAVTYMRRVYTRKSLTEYDPRLVAPTCLYLASKAEESTVQARLLVFYIKKLYADDKYRFEIKDILEMEMKILEALNYYLVVFHPYRSLSQLLQDAGLNDINMTQVTWGLVNDTYKMDLILVHPPHLIALACIYIASVLREKDTTIWFEELRVDMNVVKNISMEILDFYESQRIITDERINAAFNKLGARS 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0457 253 PIRSF Cyclin_C_H_G 1 251 - -
Dere12g0457 253 Pfam Cyclin, N-terminal domain 43 142 IPR006671 -
Dere12g0457 253 SUPERFAMILY Cyclin-like 146 236 IPR036915 -
Dere12g0457 253 PANTHER CYCLIN 29 234 IPR043198 GO:0006357|GO:0016538
Dere12g0457 253 CDD CYCLIN_AtCycC_rpt1 35 141 - -
Dere12g0457 253 FunFam cyclin-C1-2-like isoform X1 19 143 - -
Dere12g0457 253 SMART cyclin_7 46 136 IPR013763 -
Dere12g0457 253 SMART cyclin_7 149 229 IPR013763 -
Dere12g0457 253 SUPERFAMILY Cyclin-like 4 144 IPR036915 -
Dere12g0457 253 Gene3D - 7 237 - -
Dere12g0457 253 Gene3D - 19 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0457 Dere-ChrDere12 7735580 7747682 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0457 28 199 Core Cell Cycle Gene Families AT5G27620 24.725 1.43e-10 58.5