Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0456 ATGAGCCATCTTTACTCTCTAGACTTCAGAGAAGCCATGGATCTCCTTTCTCTCCCAACACTAACAGCAATTTTAACCCTAGTTTTTTCAACACTTCTATGGAGGATGAAGAACTCATCAAACCACACACTCAAAGGCATCCTAGCACCAGAGCCACCAGGTGCCTTGCCCTTAATAGGTCACCTCCATCTCCTAGGAGCTCAAGCCCCTCTCGCCCACACCTTAGCCTCTCTTGCTGATAAGTATGGCCCTATCTTCACAATCCGTCTAGGAGCCTACCCTGCCCTTATAGTCAGCAACCTTGCGGCGATAAAGGAGTGCTTCTCCACCAACGACAAAGTCTTAGCCTCTCGTCCAAGGTCCAGCCATGGAGTCCACCTCGGCTACAACTTTGCTGGCTTTGGGTTCGCACCAGACGGCTCGTATTGGCGCAAGCTAAAAAAGCTAGTCATGCTCGAACTCTTATCAGCTCGCAGGCTCGAATCACTGAGGCATGTATATGAATCTGAGACTGATATCTTTATCAGTGATTTGTTCTCGTATGTTGCAGATAACACGTCTGGTAAAACTAGAGTTGTGATCAGTGAGTGGTTGGAGCGTTTGACGTTCAATATAATCACGAAGATGGTCGCAGGGAAGAGGTATTTTGGAAACCTGCAAGATGTAGATGATGAGGAGGCTCATAGGATTGTGAAACTGATAAAAGATTTCATGCACATATCTGGAGAGTTTGTTCCTTCGGATTTGATTCCATTTCTTGGGTGGTTTAGTGTTGAAGGCCATGTTCTTAGATCCATGAAGAGAATTGCGAAGGATTTGGATTCCCTTGTATCAATTTGGGTTGAAGAACACGCTGTGAAGAAGATAAGGTCTGGGAATAATACTGAGTCATCTGAGAAGCAGGATTTCATTGATGTAATGCTATCTGTAATTGAAGAAGAGGATTCTACCTTGGGCCACACACGTGACACTATCATCAAGGCAAATATTTTGAATCTCATCTTAGCTGGGGCAGACACGACATCCATCAACATGACATGGATCCTATCCCTATTATTGAACAACAAGCACGTCCTAAAGCGAGCCCAAGAGGAGATTGATCTTCACGTAGGCAAGCAAAGATGGGTGCAAACTTCAGACATAAAATCCCTAATTTATCTTCAGGCCATAGCCAAAGAAACCCTAAGATTATACCCTCCAGGTCCTCTCTTAGTACCCCATGAAGCAACAGAAGATTGCTATATCTGTGGCTATTACGTACCTAAAGGGACGAGAGTGTTCGCCAATGTGTGGAAACTCCATAGAGACCCAACTATCTGGTCACAGCCTGAAAGGTTCTTACCTGAAAGGTTTATTACAGAGTCTGGAGATATTGATGAAGGTCACCATTTTGAGTATCTTCCTTTTGGGTCTGGAAGAAGAGCTTGTCCTGGTTCTAGTTTTGCCATGCAAGTGAGTCTATTAACTCTGGCTCGTCTGCTTCAAGGGTTTGAGCTAGAAATGGAGGAAGCTATGGTAGACATGAGAGAAGGCATGGGCATTACTTTACCCAAGGCGGCTCCATTGGAAGTTCTTCTTACTCCACGACTTCCCTCTCAATGCTATGATCACTTAGTGTTGAGAAATTCTTAA 1632 0.4461 MSHLYSLDFREAMDLLSLPTLTAILTLVFSTLLWRMKNSSNHTLKGILAPEPPGALPLIGHLHLLGAQAPLAHTLASLADKYGPIFTIRLGAYPALIVSNLAAIKECFSTNDKVLASRPRSSHGVHLGYNFAGFGFAPDGSYWRKLKKLVMLELLSARRLESLRHVYESETDIFISDLFSYVADNTSGKTRVVISEWLERLTFNIITKMVAGKRYFGNLQDVDDEEAHRIVKLIKDFMHISGEFVPSDLIPFLGWFSVEGHVLRSMKRIAKDLDSLVSIWVEEHAVKKIRSGNNTESSEKQDFIDVMLSVIEEEDSTLGHTRDTIIKANILNLILAGADTTSINMTWILSLLLNNKHVLKRAQEEIDLHVGKQRWVQTSDIKSLIYLQAIAKETLRLYPPGPLLVPHEATEDCYICGYYVPKGTRVFANVWKLHRDPTIWSQPERFLPERFITESGDIDEGHHFEYLPFGSGRRACPGSSFAMQVSLLTLARLLQGFELEMEEAMVDMREGMGITLPKAAPLEVLLTPRLPSQCYDHLVLRNS 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0456 543 PANTHER CYTOCHROME P450 82C3-RELATED 26 535 - -
Dere12g0456 543 PRINTS E-class P450 group I signature 388 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0456 543 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0456 543 PRINTS E-class P450 group I signature 476 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0456 543 PRINTS E-class P450 group I signature 429 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0456 543 PRINTS E-class P450 group I signature 466 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0456 543 PRINTS E-class P450 group I signature 325 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0456 543 PRINTS E-class P450 group I signature 79 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0456 543 PRINTS E-class P450 group I signature 103 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0456 543 PRINTS E-class P450 group I signature 345 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0456 543 FunFam Cytochrome P450 82C4 39 527 - -
Dere12g0456 543 CDD CYP82 83 529 - -
Dere12g0456 543 Pfam Cytochrome P450 50 518 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0456 543 SUPERFAMILY Cytochrome P450 50 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0456 543 PRINTS P450 superfamily signature 336 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0456 543 PRINTS P450 superfamily signature 467 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0456 543 PRINTS P450 superfamily signature 389 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere12g0456 543 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 469 478 IPR017972 GO:0005506|GO:0016705
Dere12g0456 543 Gene3D Cytochrome P450 40 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0456 Dere-ChrDere12 7715540 7721102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0456 49 535 Cytochrome P450 AT4G31940 50.000 2.99e-168 485