Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0440 ATGGCAGAAGCTAAAGTTAAGATTGCATCCAAGATCACCGTAAAGCCATCATCTGCAACCCCAAATCACCTTAAACACTTCAAAATCTCCCTCCTCGACCAGTTAGCTCCTACTTCATATTATGTTCCCATTGTTCTCTTCTACTCTGCTTCTGACATCCCCAAAACTTTTGATAATGATTTCACCAAAATGTCTGAAAAGTTAAAGAGTTCGTTATCTGAAGTTCTCACTCTCTACTACCCATTTTGTGGAAGAATCAAACGGATTAAAAACAATGCCTTTGTGGATTGCAACGATGACGGTGTCCTTTACTTTGAAGCTAGAATCCCCATGAAGCTCTCAGATTTTCTCAATAATAACAATCCACAATCCCATGAGATTAAAGAGTTTCTTCCATTAGATCCTTATAACCCAAAACCAGAGAACAACGATGATGAATACCCTTTAATAATGGCAGTTCAGGTCAGTGAGTTTGGCTGTGGAAGTGTAGGAATTGGTGTGTGCATCTCACACATGATTTGTGACGGAACAACAATAGCTTCATTTCTCCATGCCTGGTCACAAAAAGCAATGAGAAACGAAAGTGAAGTGTCATCTCCTCCTCCTAATATGGACGCTTCTACGCTTTTCCCACCGAAAGAGATACAGTTCGACGTAACGAGTGGGATGACTGGCGAGAAGAATATTTCAACGAAGAGGTTTGTATTTAGTGGGAATAGCTTGCGCATACTAAGAGATGAAGTATCTGGAGGCTGCAATTTTAAGCCCACTAGAGTTGAAGCTGTGACGGCTCTGATATGGAAATCCGCCATGGAAGCTGCAACAATTGCAGACACAAATCATCAGAGTAGCTCATCTATGATGTCCCATGTGGTGAACATCCGCAGCCGAATGGTGCCGCCGTTGCCGGAGAATTCCATAGGTAATCTCTGGCAAGTGGCTCTTTCACCATTGCTTGAAGTTGACGAAGTTAAAGAGGTAGGGCTGCAAGATTTGGCAGAAGAAGTGAGAAGAACCATAAGAAAAGTTGATAGAGATTATGTGAGTAAGCTTCAAGGAGATGCAGAAGGGCTCGCTGAGGTCCTTAAATCACTGAAAGAAACGGTGTGTTTGGTGGCCATGAAAGGTGTTCCATGCTATGCCTTCAGTAGCTGGGTAAGGTTTGGATTCTACGAAGCAAACTTTGGATTGGGGAAGCCAACGTGGGTCTGTACGATTGGAGTGCCTATAAGAAATGTGGTCATCTTGATGCCCACAAGATGTGGGGATGGAATTGAGGCATGGGTCACCTTGAACGAGCTCCATATGATTCAATTTGAGACCAACCCAAAGCTTCTTCAGTTTGCTTCTTTTAATCCTTAA 1362 0.4288 MAEAKVKIASKITVKPSSATPNHLKHFKISLLDQLAPTSYYVPIVLFYSASDIPKTFDNDFTKMSEKLKSSLSEVLTLYYPFCGRIKRIKNNAFVDCNDDGVLYFEARIPMKLSDFLNNNNPQSHEIKEFLPLDPYNPKPENNDDEYPLIMAVQVSEFGCGSVGIGVCISHMICDGTTIASFLHAWSQKAMRNESEVSSPPPNMDASTLFPPKEIQFDVTSGMTGEKNISTKRFVFSGNSLRILRDEVSGGCNFKPTRVEAVTALIWKSAMEAATIADTNHQSSSSMMSHVVNIRSRMVPPLPENSIGNLWQVALSPLLEVDEVKEVGLQDLAEEVRRTIRKVDRDYVSKLQGDAEGLAEVLKSLKETVCLVAMKGVPCYAFSSWVRFGFYEANFGLGKPTWVCTIGVPIRNVVILMPTRCGDGIEAWVTLNELHMIQFETNPKLLQFASFNP 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0440 453 Gene3D - 3 219 IPR023213 -
Dere12g0440 453 Pfam Transferase family 4 444 - -
Dere12g0440 453 Coils Coil 348 368 - -
Dere12g0440 453 PANTHER F21J9.9 7 450 - -
Dere12g0440 453 Gene3D - 226 447 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0440 Dere-ChrDere12 7456451 7458007 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0440 5 440 Monolignol Biosynthesis Gene Families AT5G48930 24.229 1.05e-30 121