Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0432 ATGGCTTGTGCTTCGATGTTGCTTCCATTTCAGTCCAAATTCCTTCAAGTAGCAATCCATGTCTTCTATGCAAACTTGCTTTGCTTGCATCATATTAGAGCTGCATCTACATTAGGAAACCAGACTGATTATTTGGCATTGGTGAAGTTTAAGGATTCAATATCCGATGATCCTTATGAAATCCTGAGCTCTTGGAATAGTTCAACCCACTTCTGCAGTTGGAATGGAATCACATGTGGCCACAGGCATCAGCGAGTCACAGAGTTGAACCTGGGAGAATATCGTCTCCGTGGGATCATATCACCCCATGTTGGCAACCTTTCCTTCCTGAGAAATCTATACCTCCAAAACAACAGCTTCTATGGAGAAATCCCACCCGAGTTGGGACGTTTGTTCAGGCTGCAGCAACTCTCTTTCATGGACAACACATTAACAGGGGAGATTCCGTTCAACTTGATAAATTGCTCTGAACTCAGGCACTTAAATTTATCAGGTAATAGTCTTATTGGTAAAATACCATTTCAGCTTGGCTATCTTAAGAAGCTTCAAAAATTTATCATTTCAAAAAACAATTTGACTGGACAAATCCCAGCTTCCATATGGAATCTTTCTTCCCTCGATGCTCTTTCAGTGGGTTATAACAACTTGGAAGGGAGCATACCAGAAGAAATAGGCCATTTGAAGAACTTGAAACATTTATCAATAGCATCGAACAAATTTTCTGGTATGATTCCTTTGTCACTATACAATATATCATCTCTCATTATCATATCGGCAGCAGAAAATCAACTGAATCGCACTCAGCTTCCAGACAATATGTTCTACACCCTCCCCAATTTGAAAGGGTTTGGCATAGCAGTGAATCAAGTTTCAGGTCCAATCCCAAATTCCGTTACAAATGCATCTTCTCTTCAAATATTTGACATTGGTGCAAACTCTTTTGTTGGAAAAGTTCCAAATCTAGGAAACCTAAAAGACCTGCAGTGGCTACATTTTGGACATAATAATCTTGGCAGTAATTCAAATAATGACTTGGATTTCATAGCATCTCTAAAAAATTGTAGCAAATTGGAAATATTCAGTCTTGCTTTCAACAATTTTGGAGGCATCTTTCCCAAATCCATAGGAAATTTGTCAACCCAACTCAATAATCTTTTCCTTGGTGGTAATCAGATATATGGAACTATTCCTGCAACTTTAGCAAAGTACACGAATATCATTGCCTTGAGTTTAAAATACAACCAACTTTCTGGCACCATTCCTGCTTCTTTGGGCAATATTCATAAGATACAACTTTTGGATTTGGGGGAAAACCACCTCTCTGGAGAAATACCAACCAGCTTAGGCAACCTCAGTCAATTGGTTATTCTAAGCCTTCAAGAAAATATGCTTGAAGGAAAAATTCCCCCCATCATTGGAAATATGAAACACTTGCAAATCCTAGCCCTTGCAAAGAACAATCTTAATGGAGTTATACCCTTACAGGTTTTTTCTCTTCCTTCCTTGTCCAGGTTATTAAACTTATCTAGTAACACATTAATTGGATCTCTGCCTATTGAGGTGGGAACCCTCATAAACCTTGGGAGTTTGGATATCTCAGAAAACCATCTTTCCGGGGAGATTCCATTGTCCATAGGAGAGTGTGAAAGTATGGAATATCTCAACTTGCAAGGGAATTGGTTCAATGGATCCTTACCTCCTTCACTAGCATCATTGAAAGGCCTTATGCATCTTGATCTATCACGAAACAACTTGACTGGATCAATTCCAGCAAGTTTACAGAATATTTCTGTTCTTGAATACTTGAATGTTTCTTTTAATGATTTGGCTGGTGAAATACCAGTCGAAGGGGTTTTCAGCAATGCAAGTGCAATATCAGTGGTTAGTAATAAAAAGCTTTGTGGGGGTATCTCTAAGCTGCATTTACCGCCTTGCCCTATCAAAATTGACACACAAAGAAAACACCACAATTCAAAGTTCCTGGGAATTATTATTTGTGTGGTTTTCTCTCTTTTGTTGATATCTATTCTTGCTCTTTATTGGAGGAAGAAAAGAAACAAAAGACCATCTTCAGAATCACCAACAATTGACCAATATTCCAAGGTGTCATACCAAAATCTACACTCTGCAACTGATGGGTTCTCCGTTAACAACTTGATAGGATCTGGAAGCTTTGGATCAGTGTATATTGGAAGGCTAGAATCTGAAGACAAAGTTGTTGCTATAAAGGTCCTAAATCTTCAAAAGAAGGGAGCTCACAAGAGTTTCATTTCAGAATGTAATGCACTTAAAAATATAAGGCATCGAAATCTAGTTAAGATTTTGACATGTTGCTCAAGCATTGATTATAAAGGCAATCAATTTAAAGCACTAGTCTTTGAGTACATGTCAAATGGAAGCCTTGAAAAATGGTTACATCCTGTTCCAGAAAGTGAAGATCAACCTCCAACATTGGATCTTGGTCAAAGATTAAATATTATATATGATGTTGCACTAGCACTACATTATCTTCATTATGAATCAAGACTTCTCTCAACCCTTGATGGTAGCACTCAAAAGCAAACCAGCACAACTGGAATAAAAGGGACCATTGGCTATGCTCCTCCAGAGTATGGAATAGGTCTCGAGGTGTCAACGCAGGGTGATTTATACTCATTTGGAATTCTTGTTTTGGAAATGTTAACTGGAAGGAGACCCACAGATGAGATGTTCAAAGATGGCCACAATCTTTATAGCTATGTGAATAATGCATATCGAAATGACCTGTTGGAGATTGTGGACTCAACTCTTCTGCCACAACAAATACAGCAAGCAACAATAGCTACAGAAGAAGAAATTTGCATGGAGGTGCTGACTCTAATGCATCCTAATGAAAAGAAGTCTATTCTTTCTCTATTTGGGATTGGACTTGCTTGCTCAGTGGACTCCCCAAATGAAAGAGTGAACATGATAGATGTCATAAGGCAGCTAAATCAAATTCAAAAAGCTTTTCGTTTTGGTGAAAATAATATGGACATTGACCACAAAACAAAGAATGGGGAAATGCCACTTTAG 3054 0.3824 MACASMLLPFQSKFLQVAIHVFYANLLCLHHIRAASTLGNQTDYLALVKFKDSISDDPYEILSSWNSSTHFCSWNGITCGHRHQRVTELNLGEYRLRGIISPHVGNLSFLRNLYLQNNSFYGEIPPELGRLFRLQQLSFMDNTLTGEIPFNLINCSELRHLNLSGNSLIGKIPFQLGYLKKLQKFIISKNNLTGQIPASIWNLSSLDALSVGYNNLEGSIPEEIGHLKNLKHLSIASNKFSGMIPLSLYNISSLIIISAAENQLNRTQLPDNMFYTLPNLKGFGIAVNQVSGPIPNSVTNASSLQIFDIGANSFVGKVPNLGNLKDLQWLHFGHNNLGSNSNNDLDFIASLKNCSKLEIFSLAFNNFGGIFPKSIGNLSTQLNNLFLGGNQIYGTIPATLAKYTNIIALSLKYNQLSGTIPASLGNIHKIQLLDLGENHLSGEIPTSLGNLSQLVILSLQENMLEGKIPPIIGNMKHLQILALAKNNLNGVIPLQVFSLPSLSRLLNLSSNTLIGSLPIEVGTLINLGSLDISENHLSGEIPLSIGECESMEYLNLQGNWFNGSLPPSLASLKGLMHLDLSRNNLTGSIPASLQNISVLEYLNVSFNDLAGEIPVEGVFSNASAISVVSNKKLCGGISKLHLPPCPIKIDTQRKHHNSKFLGIIICVVFSLLLISILALYWRKKRNKRPSSESPTIDQYSKVSYQNLHSATDGFSVNNLIGSGSFGSVYIGRLESEDKVVAIKVLNLQKKGAHKSFISECNALKNIRHRNLVKILTCCSSIDYKGNQFKALVFEYMSNGSLEKWLHPVPESEDQPPTLDLGQRLNIIYDVALALHYLHYESRLLSTLDGSTQKQTSTTGIKGTIGYAPPEYGIGLEVSTQGDLYSFGILVLEMLTGRRPTDEMFKDGHNLYSYVNNAYRNDLLEIVDSTLLPQQIQQATIATEEEICMEVLTLMHPNEKKSILSLFGIGLACSVDSPNERVNMIDVIRQLNQIQKAFRFGENNMDIDHKTKNGEMPL 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0432 1017 FunFam LRR receptor-like serine/threonine-protein kinase EFR 684 795 - -
Dere12g0432 1017 Gene3D Phosphorylase Kinase; domain 1 695 795 - -
Dere12g0432 1017 ProSiteProfiles Protein kinase domain profile. 714 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g0432 1017 SUPERFAMILY Protein kinase-like (PK-like) 687 990 IPR011009 -
Dere12g0432 1017 Gene3D Ribonuclease Inhibitor 273 646 IPR032675 -
Dere12g0432 1017 PANTHER OS04G0122200 PROTEIN 225 994 - -
Dere12g0432 1017 Pfam Leucine rich repeat 569 609 IPR001611 GO:0005515
Dere12g0432 1017 Pfam Protein tyrosine and serine/threonine kinase 716 839 IPR001245 GO:0004672|GO:0006468
Dere12g0432 1017 Pfam Protein tyrosine and serine/threonine kinase 851 921 IPR001245 GO:0004672|GO:0006468
Dere12g0432 1017 Gene3D Transferase(Phosphotransferase) domain 1 843 995 - -
Dere12g0432 1017 Gene3D Ribonuclease Inhibitor 40 199 IPR032675 -
Dere12g0432 1017 Pfam Leucine rich repeat N-terminal domain 41 79 IPR013210 -
Dere12g0432 1017 SMART LRR_typ_2 203 227 IPR003591 -
Dere12g0432 1017 SMART LRR_typ_2 572 595 IPR003591 -
Dere12g0432 1017 SMART LRR_typ_2 524 548 IPR003591 -
Dere12g0432 1017 SMART LRR_typ_2 475 499 IPR003591 -
Dere12g0432 1017 SMART LRR_typ_2 107 131 IPR003591 -
Dere12g0432 1017 Pfam Leucine Rich Repeat 158 173 IPR001611 GO:0005515
Dere12g0432 1017 Gene3D Transferase(Phosphotransferase) domain 1 796 842 - -
Dere12g0432 1017 ProSitePatterns Protein kinases ATP-binding region signature. 720 743 IPR017441 GO:0005524
Dere12g0432 1017 SUPERFAMILY L domain-like 41 337 - -
Dere12g0432 1017 FunFam LRR receptor-like serine/threonine-protein kinase EFR 343 651 - -
Dere12g0432 1017 FunFam Leucine-rich repeat receptor protein kinase EMS1 151 247 - -
Dere12g0432 1017 SUPERFAMILY L domain-like 380 635 - -
Dere12g0432 1017 Gene3D Ribonuclease Inhibitor 202 272 IPR032675 -
Dere12g0432 1017 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 42 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0432 Dere-ChrDere12 7308547 7311817 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0432 40 997 Receptor kinase-like Gene Family AT3G47570 42.400 0.0 763
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Dere12g0432 PK_Tyr_Ser-Thr 1.3e-18 CL0016