Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0429 ATGCTTCAGGCTACGGGCGAAACTTCAAGGAGGGAATTTCCATATCTCAATCTCCATAGCGTTCACACTCTTTACCTTCTGTTCTTCAACCCAACAATGACTTCTGCTCGCATGTCACTTATGTTTTCTTCCATATATCATCAAGCTATCCTTATTTTTTGTGTAAACTTACTTTGGCTTCAACATGTTAGATCTGCATCTGAATTGGGAAATGAGACTGATTATATGGCACTACTCAAGTTTAAAGAATCAATTTCCAGTGATCCATATGAAATCTTGAGCTCATGGAATAGTTCAAATCACTTCTGCAATTGGCATGGAATCACATGCAGCCGCAAGCATCAAAGAGTCACAGAGTTGAGGCTGCGAGGATATCATTTGCGCGGGGTCCTTTCGCCCGATGTTGGCAACCTCTCCTTCCTGAGGAACCTGTACCTCCAAAACAATAGCTTTTATGGAGAAATCCCACCAGAACTGGGTCGCTTATTCAGGCTGCAGCAACTATCTCTCAGTGATAATACATTGACAGGGGAGATTCCCATCAACCTGACAACTTGCACTGAACTGAGGCATTTAAATTTGTCAAGCAATAGTCTTAGTGGTAAAATACCATTTGAGCTTGGCTCTCTTAGGAAGCTTGAAAAGTTGAAAATCTTTACAAACAATTTAACTGGAGAAATCCCAGCTTCCATTTGGAATCTTTCCTCCCTTAATGTTCTTTCAGTGGCTTATAACAACTTGGAGGGGAGCATACCAAAAGAAATAGGATTTTTGAAGAACTTGAGTGTTTTATCAATAGTTGAGAACAAATTTTCTGGTGCGCTTGCTTCTTCACTTTATAATATGTCATCTCTCACATTCATATCTGCAGCAAACAACCAACTGAATCGCACTCGGCTTCCAGACAACATGTTTACCACCCTCTCTAATTTGCAAGCGTTTGGCATAGGTGGGAATCAAATATCAGGTTCAATCCCAAGTACAATCACAAATGCATCTTTTCTTCAAATATTTGATATTGGTATAAACTATTTTGTTGGAAAAGTTCCAAGTCTTGGAAACTTGAAAGATCTGCAGTGGCTAAATCTGAACTATAATATTCTTGGAAGCAGCTCAAATGATGACTTGGATTTCATAACATCTCTAGAAAACTGTAGCAAACTAGAGAATTTGATTCTATCCACCAACAGATTTAGAGGTCTTTTACCCAATTCCATAGGCAATTTGTCAACCCAACTCATTCGACTATACCTTGGTGATAATCAGATATATGGAACTATTCCTGAATCTTTAGAAAAGTACACAAATTTAATTGCCTTGGTCCTAGAATACAACCAGTTTACAGGCCCAATTCCAGCTTCTTTTGGGAAGCTTCATAATATGCAAACACTAGGCTTGGGGGCAAACCAACTCTCTGGTGAGATACCAGCCTCCTTGGGCAACCTCAGTCAATTGGTTCAACTAAGCGTTTCAGAGAATGCGCTTGAAGGAAAAATTCCACCCATGGTAGGAAATTGGCAAAATATAGTATTTCTGGACCTTTCAAAAAACAATCTTAGTGGAGCTATACCCTTGCAAGTTTTTAGTCTTTTCTCATTATCCATGTTACTAAACTTTTCTCACAACTCATTAAATGGCTCTCTACCTATTGATGTGGGAAACCTTAAAAGTCTTGGCACTTTGGATATCTCTGAAAATCATCTTTCTGGGGAGATTCCTGGGACCACAGGAGAATGCACAAGTATGGAATACCTTGACTTACAGGGGAATTTGTTCAATGGAACCATGCCTTCTTCACTAGCTTCATTGAAAGGCCTTAAGCATCTTGATCTATCACTAAACAACTTGTCTGGTTCAGTACCAACAGGTTTACAGAATATTTCTGTGCTTGAATACTTGAACCTTTCTTTTAATGCATTGGATGGCGAGCTACCAACAGAAGGGGTTTTTAGGAATGCTAGTGCGATATCAGTTGCTGGTAATAATAAGCTTTGTGGGGGTATATCTGAGCTACATTTACCACCATGCCCTATCAAAATTGAGACACAAAGTAAACACCTTAATTTGAAGCTGATGGTAATTATCATTTGTGTGACTGTCGGTCTTCTGTTGTCATCTATGCTTGCTATCTACCTGAGGAGGAAAAGGAATAGGACATCATCTTCAACTTCCCCGGCAATTGGCCAACTTTCCAAGGTGTCATACCAAAGCCTACACTCTGCGACTGAAGGATTCTCTAACAACAACTTGATTGGATCTGGAGTTTTTGGTTCTGTGTATAAAGGAAGGCTACAGTCAGAAGAAAAACTTGTTGCTATAAAGGTCTTCAACCTTCAAAAGATGGGAGCTCACAAGAGTTTCATTTCTGAATGTAATGCACTTAAAAATATCAGGCATCGAAATTTGGTTAAGATCTTAACATGTTGCTCCAGCATAGATAATAAAGGCCAAGAATTCAAAGCACTAGTCTTTGAATACATGTCCAATGGAAGCCTAGAAGAATTGTTGCATCCTAATCCAGAAAGTATAGATCAGCCTAGAACTTTAAATCTGGATCAAAGAATAAATATTCTAAACGATGTTGCTTCTGCACTTCATTATCTTCACTATGGATGTGAGCAAACTATTGTCCACTGTGACTTAAAGCCAAGTAATGTCCTTCTTGATGATGATATGGTTGCTCATGTGAGTGACTTTGGGTTAGCAAGACTCCTCTCAACACTTAATGACAGCTCTCGAAATCAAACCAGCACAACTGAAATAAAAGGGACAATTGGCTATGCTCCTCCAGAGTATGCAATAGGTTCAAAGGTATCAACACGAGGTGATGTATATTCTTATGGGATTCTAGTTTTGGAAATGCTAACTGGGAGAAGACCAACAGAAGAAATGTTCAAAGATGGTCACAATCTCTATAACTATGTGAAAACTGCATACCCAAATAACCTCTTGGACATTGTGGACTCAACTCTTCTACCAAAACAAACAAAGAAGACAGCAACAGCATCATCAGAGCAAATCAACATGGAGAAGCAGATCCTTATGCATTCTAAGGGAGAGAAGTCTATAGTCTCACTAATTAGAATTGGACTTGCTTGCTCAGCAGAATCGCCAAAAGAAAGAGCAAACATGATGGATGTCACGAGGGAGCTAAATCTAATTATAAATGATTTTTGTTGTAGTGACTCAAATGGAGATTGA 3201 0.3902 MLQATGETSRREFPYLNLHSVHTLYLLFFNPTMTSARMSLMFSSIYHQAILIFCVNLLWLQHVRSASELGNETDYMALLKFKESISSDPYEILSSWNSSNHFCNWHGITCSRKHQRVTELRLRGYHLRGVLSPDVGNLSFLRNLYLQNNSFYGEIPPELGRLFRLQQLSLSDNTLTGEIPINLTTCTELRHLNLSSNSLSGKIPFELGSLRKLEKLKIFTNNLTGEIPASIWNLSSLNVLSVAYNNLEGSIPKEIGFLKNLSVLSIVENKFSGALASSLYNMSSLTFISAANNQLNRTRLPDNMFTTLSNLQAFGIGGNQISGSIPSTITNASFLQIFDIGINYFVGKVPSLGNLKDLQWLNLNYNILGSSSNDDLDFITSLENCSKLENLILSTNRFRGLLPNSIGNLSTQLIRLYLGDNQIYGTIPESLEKYTNLIALVLEYNQFTGPIPASFGKLHNMQTLGLGANQLSGEIPASLGNLSQLVQLSVSENALEGKIPPMVGNWQNIVFLDLSKNNLSGAIPLQVFSLFSLSMLLNFSHNSLNGSLPIDVGNLKSLGTLDISENHLSGEIPGTTGECTSMEYLDLQGNLFNGTMPSSLASLKGLKHLDLSLNNLSGSVPTGLQNISVLEYLNLSFNALDGELPTEGVFRNASAISVAGNNKLCGGISELHLPPCPIKIETQSKHLNLKLMVIIICVTVGLLLSSMLAIYLRRKRNRTSSSTSPAIGQLSKVSYQSLHSATEGFSNNNLIGSGVFGSVYKGRLQSEEKLVAIKVFNLQKMGAHKSFISECNALKNIRHRNLVKILTCCSSIDNKGQEFKALVFEYMSNGSLEELLHPNPESIDQPRTLNLDQRINILNDVASALHYLHYGCEQTIVHCDLKPSNVLLDDDMVAHVSDFGLARLLSTLNDSSRNQTSTTEIKGTIGYAPPEYAIGSKVSTRGDVYSYGILVLEMLTGRRPTEEMFKDGHNLYNYVKTAYPNNLLDIVDSTLLPKQTKKTATASSEQINMEKQILMHSKGEKSIVSLIRIGLACSAESPKERANMMDVTRELNLIINDFCCSDSNGD 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0429 1066 Gene3D Ribonuclease Inhibitor 73 188 IPR032675 -
Dere12g0429 1066 Gene3D Ribonuclease Inhibitor 375 678 IPR032675 -
Dere12g0429 1066 Pfam Protein kinase domain 746 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g0429 1066 SUPERFAMILY L domain-like 411 666 - -
Dere12g0429 1066 ProSitePatterns Serine/Threonine protein kinases active-site signature. 876 888 IPR008271 GO:0004672|GO:0006468
Dere12g0429 1066 FunFam Leucine-rich receptor-like protein kinase family protein 182 277 - -
Dere12g0429 1066 ProSitePatterns Protein kinases ATP-binding region signature. 751 774 IPR017441 GO:0005524
Dere12g0429 1066 Pfam Leucine rich repeat N-terminal domain 72 111 IPR013210 -
Dere12g0429 1066 Gene3D Ribonuclease Inhibitor 301 374 IPR032675 -
Dere12g0429 1066 SUPERFAMILY Protein kinase-like (PK-like) 719 1052 IPR011009 -
Dere12g0429 1066 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 827 1063 - -
Dere12g0429 1066 FunFam LRR receptor-like serine/threonine-protein kinase EFR 716 826 - -
Dere12g0429 1066 PANTHER OS04G0122200 PROTEIN 258 1047 - -
Dere12g0429 1066 Pfam Leucine rich repeat 581 640 IPR001611 GO:0005515
Dere12g0429 1066 Gene3D Ribonuclease Inhibitor 197 300 IPR032675 -
Dere12g0429 1066 Pfam Leucine Rich Repeat 189 208 IPR001611 GO:0005515
Dere12g0429 1066 Gene3D Phosphorylase Kinase; domain 1 715 826 - -
Dere12g0429 1066 FunFam LRR receptor-like serine/threonine-protein kinase EFR 374 682 - -
Dere12g0429 1066 Gene3D Transferase(Phosphotransferase) domain 1 827 1061 - -
Dere12g0429 1066 SMART LRR_typ_2 627 652 IPR003591 -
Dere12g0429 1066 SMART LRR_typ_2 282 307 IPR003591 -
Dere12g0429 1066 SMART LRR_typ_2 555 579 IPR003591 -
Dere12g0429 1066 SMART LRR_typ_2 138 162 IPR003591 -
Dere12g0429 1066 SMART LRR_typ_2 603 626 IPR003591 -
Dere12g0429 1066 SMART LRR_typ_2 385 408 IPR003591 -
Dere12g0429 1066 SMART LRR_typ_2 458 482 IPR003591 -
Dere12g0429 1066 SMART LRR_typ_2 234 258 IPR003591 -
Dere12g0429 1066 SMART serkin_6 745 1013 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g0429 1066 SUPERFAMILY L domain-like 71 368 - -
Dere12g0429 1066 ProSiteProfiles Protein kinase domain profile. 745 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g0429 1066 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 73 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0429 Dere-ChrDere12 7268353 7272719 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0429 71 1051 Receptor kinase-like Gene Family AT3G47570 46.626 0.0 844
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Dere12g0429 Pkinase 1.9e-45 CL0016