Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0412 ATGGAAGGTCGCCGGAGAATAACGCTTTATGATCAAATGTCAGCCGTCGACGGCAGCCGAGACTCGCTGGCCGGCTCGACCCTCGACGCCTTGATGGCAAGCCACAAGATAGCATCTGAGCCGAGCCGCCGCCAGTTCAGCAGCAGCCGAACCCTCCTAGACATCATCCGGGAGGACGATTCCAACAAGAAGGACAGGAAATCCTGGAAAGTCTTCAGAGACAAGCTTCGGCTCATGCGCGCCGGATCTGCTTGGTTCTCCGCAATCCAAATCCCGGCCTCGGATATCCCTATCTCCAACCGGAGTAACAGCAACTCGCGCCTGACCTCCAACTCCGACGTCCCATCTACAAGCACCAGGGCCGAATTCTCGGTCCAGATCTCGACCCGACAAGGATCTTCACTCAACGCCGCCTTCTCCGGCGAGCCCACACCCCAAATGTCGCGCCCAGATCCCTTCCGGCGAGAAGGTGCAGTGACTTTCCGGGATTGCCTGGACAGCGACGACGACGGATCCGACTACGACGATTGGGATCCGGCTCGTGAAGGGACGCGCCGCCTCTCCACTGTTTTATCAGAGGAGAGGGCGTTGTCTGCCAGAGAAGCGGAGGATGCAGCGGCGGCGGCGGCGGAGGAGGAGGAGGAACCGGTGAGGATGTCGCTGATGGATTTGCTGGAGGAGACAGATAGGCAAATGGGGTTTGAAGCATCGGGATACGGAATGGGAGATGATGAAGGGTATGAGAATGTGACAGTGAGAGAACACTTCGAAGAAGAAGAAGAAGGCGAAGGGGTAGAAGAATGCAAAGAAGGGACTATACAGCAAAATTGTTGTGTGTGTATGGTGAGGCATAAGGGTGCTGCGTTTATACCGTGCGGTCACACTTTTTGCAGGCTCTGTTCGAGGGAGCTTTGGGTGAGTAGAGGGCACTGTCCACTCTGCAACAATTTTATTCTGGAAATTCTTGACTTATTTTGA 978 0.5552 MEGRRRITLYDQMSAVDGSRDSLAGSTLDALMASHKIASEPSRRQFSSSRTLLDIIREDDSNKKDRKSWKVFRDKLRLMRAGSAWFSAIQIPASDIPISNRSNSNSRLTSNSDVPSTSTRAEFSVQISTRQGSSLNAAFSGEPTPQMSRPDPFRREGAVTFRDCLDSDDDGSDYDDWDPAREGTRRLSTVLSEERALSAREAEDAAAAAAEEEEEPVRMSLMDLLEETDRQMGFEASGYGMGDDEGYENVTVREHFEEEEEGEGVEECKEGTIQQNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGHCPLCNNFILEILDLF 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0412 325 MobiDBLite consensus disorder prediction 96 120 - -
Dere12g0412 325 Pfam Zinc finger, C3HC4 type (RING finger) 274 318 - -
Dere12g0412 325 SUPERFAMILY RING/U-box 276 321 - -
Dere12g0412 325 MobiDBLite consensus disorder prediction 195 217 - -
Dere12g0412 325 CDD RING-HC 277 314 - -
Dere12g0412 325 SMART ring_2 277 314 IPR001841 -
Dere12g0412 325 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 249 325 IPR013083 -
Dere12g0412 325 ProSiteProfiles Zinc finger RING-type profile. 277 315 IPR001841 -
Dere12g0412 325 PANTHER OS01G0917900 PROTEIN 19 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0412 Dere-ChrDere12 6863767 6864744 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0412 4 325 C3H Transcription Factor Family AT3G25030 40.000 1.39e-56 182