Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0407 ATGGCTTCACCTCCCTCACCTAAGCCCTTCTACCCCGTCACCACCAGCGCCACCGCCTCACCCACCAAGAAACACCAACCAATTCCATGGACCCATCAAGAAACAATCAACCTCATCCAAGCCTACCAGGAGAAATGGTACTCCCTCAAGCGAGGTCAGCTGAGGGCCAGCCAGTGGGAGGAGGTTGCCGTCACCGTCGCCGCCCGATGCGGCTACGACTACAACGAGCCTTCTAAGACCGCCGTCCAGTGCCGCCACAAGATGGAGAAGCTCCGCCAACGGTTCCGTGCCGAGAACCAGCGTCTCGTTGCTTCCTCCGGCGGCGGTCGTGCTTGGCAATACTTTGGCCTCATGGACCAATTGGAGAAAGGCCCTTTGCCTATTTCTGCTCGACCCCTTGTGGCTTTGATGCCCTTTCATTATGATGATAATGAAGAGGAAGATGATGATGATGAAGAGAATGAAATTGATGAAAGACAGCACTATAGTCAGTCAAGGAGGGTTGATCATATTCTCTGCCAGCGACCCGTAAGTAAATCTAGAGAAGTTTCTGAGTTTTCTCGGGTGCAAGTAGCAAAGAGGTTATGGAGGGTCTCCGACGAGGAAGAAGAGGAGGAGGAAGAGGATCTTGAGGAGGTATATGGCAAAAGAATGGTGAAAGGAATGGGATTAGTTTCTGGGTTGGCTGCAGAGATGAAGGCTTTTGCAGAAAGATTTATTGGGATGGAGAACTTGAAGATGGAGATGATGAAGGAAACTGAGAGGAGTAGACTGGAGATGGAGAATAAGCGGATTGAGATGATTGTCAAATCGCAGCAGAGAATTGTTGATTCAATTGGGAAGGCTTTTGGGTTCCCTAAGAAGATGAAGAGAAGTCATGAAATATGA 888 0.4977 MASPPSPKPFYPVTTSATASPTKKHQPIPWTHQETINLIQAYQEKWYSLKRGQLRASQWEEVAVTVAARCGYDYNEPSKTAVQCRHKMEKLRQRFRAENQRLVASSGGGRAWQYFGLMDQLEKGPLPISARPLVALMPFHYDDNEEEDDDDEENEIDERQHYSQSRRVDHILCQRPVSKSREVSEFSRVQVAKRLWRVSDEEEEEEEEDLEEVYGKRMVKGMGLVSGLAAEMKAFAERFIGMENLKMEMMKETERSRLEMENKRIEMIVKSQQRIVDSIGKAFGFPKKMKRSHEI 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0407 295 FunFam Trihelix transcription factor ASIL2 30 97 - -
Dere12g0407 295 ProSiteProfiles Myb-like domain profile. 29 92 IPR001005 -
Dere12g0407 295 MobiDBLite consensus disorder prediction 1 27 - -
Dere12g0407 295 Pfam Myb/SANT-like DNA-binding domain 29 121 IPR044822 -
Dere12g0407 295 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 12 280 IPR044823 -
Dere12g0407 295 Gene3D - 30 97 - -
Dere12g0407 295 SMART 118neu2 37 126 IPR006578 -
Dere12g0407 295 MobiDBLite consensus disorder prediction 12 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0407 Dere-ChrDere12 6803370 6804257 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0407 30 121 Trihelix Transcription Factor Family AT3G14180 34.409 6.82e-13 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dere12g0407 Myb_DNA-bind_4 2.3e-18 CL0123