Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0372 ATGGCAGAAGCAGAGATTGTATCCAGAACGACCGTAAAGCCATCATGTCCTACTCCATCTCATCTTCAACGCTTTAGAATCTCTCTTCTTGACCAGATAGCTCCTCCTTCCTTCTACGTTCCCATTGTGCTCTTCTATTCTGATCTCAGTCGTCATGGATTCACCAAAATATCTGAAACCCTAAAGGCTTCGCTGTCACAAGTTCTCACTCTTTACTTCCCATTTTGTGGAAGAATCAAAGGAAACAAAAGCAATGCCTTCGTGGACTGCAACGATGAAGGTGTTCTTTATCTTGAGGCTAGAATCCCACTTAAGCTCTCGGATTTTCTCAGTAAGAATCAACAGCCCAATGAGATTAAAGCGTTTCTTCCATTAGATCCGTACAACCCAAAATCCGAAAATGGTGGTGATGACGATGAAGATCCTTTTATAATGGAAGTTCAGGTTACTGAGTTTAGCTGTGGAAGCGTAGGGATCGGTGTGTGTATCTCACACAGAATCTGTGATGGAGCAACAATAGCTTCGTTTCTCCAAGCTTGGTCTGAGACAGCGATGGCAGATGGAAATGGAACATACAATGCTTCTCAGTCTCCTCCTAATATGGAAGCTTCTCTGCTTTTTCCTCCACGAGAGATAGATATGAACACGACGAGTGGGATGATTGGTGAGAAGAATATTTCAACAAGGAGGTTCTTGTTTAGTGGGAAAAGCTTGAGTAGACTCATAGATAAACTAGTTTATAGAGGCTGCAATCATAAACCCACAAGAGTTGAAGCTGTGTCTGCTCTCATATGGAAATCCGCCATGGAAGCTGCAGATGACGCTCGTCAATCCATGGTGTCGCATGCAGTCAACATTCGTAGATGTATGGTGCCTCCCCTGCCGGAGAACTCTATAGGAAATCTCTGGCAACAAGCTGTGTCTCCAATATTGGTGAAAGAAGACAAAGCAAAGGATTTAGAGCTGCAACATTTGGCAGAGGTGGTGAGAAAAACCATAAAAAAAATTAATGAAAATTATGTGAGTAAGCTTCAAGGAGATGGTGAAGGGGTTTATGAGGTCCTTAAATCATTGAAGGAAGTGAAGCTTTTGGTGGCGAAAAAAGGAGTTCCTTGCTATAGCTTTAGCAGCTGGACGAGGTTTGGTTTCTATGAAGCAGAGTTTGGATTTGGGAAGCCAACGTGGGTGTGTACTATTGGAGTTCCTATAAGAAATGTGATCATTTTAATGCCCACAAAATGTGGGGAAGGAATAGAGGCATGGGTGACCTTAAATGAGCTTCATATGACCCAATTTGAAAGCAATTCAGAGCTTCTTCAGTTTGCTTCTTTTGATCCATAA 1341 0.4243 MAEAEIVSRTTVKPSCPTPSHLQRFRISLLDQIAPPSFYVPIVLFYSDLSRHGFTKISETLKASLSQVLTLYFPFCGRIKGNKSNAFVDCNDEGVLYLEARIPLKLSDFLSKNQQPNEIKAFLPLDPYNPKSENGGDDDEDPFIMEVQVTEFSCGSVGIGVCISHRICDGATIASFLQAWSETAMADGNGTYNASQSPPNMEASLLFPPREIDMNTTSGMIGEKNISTRRFLFSGKSLSRLIDKLVYRGCNHKPTRVEAVSALIWKSAMEAADDARQSMVSHAVNIRRCMVPPLPENSIGNLWQQAVSPILVKEDKAKDLELQHLAEVVRKTIKKINENYVSKLQGDGEGVYEVLKSLKEVKLLVAKKGVPCYSFSSWTRFGFYEAEFGFGKPTWVCTIGVPIRNVIILMPTKCGEGIEAWVTLNELHMTQFESNSELLQFASFDP 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0372 446 Pfam Transferase family 5 438 - -
Dere12g0372 446 PANTHER F21J9.9 5 443 - -
Dere12g0372 446 Gene3D - 2 216 IPR023213 -
Dere12g0372 446 Gene3D - 223 442 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0372 Dere-ChrDere12 6289245 6291243 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0372 6 433 Monolignol Biosynthesis Gene Families AT5G48930 23.947 9.95e-27 109