Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0353 ATGGAACTAAATAAGCCTGAAATCTTGTTAGTTGCCAATACTAGAAGGACTCCTGGCATGTCGACTCAACGCACACATGTAGAATCAGCCTGTGGTGTTTTAAAAACTGGGCAGGTTGCACATAACAATATCTCTATAAAGCCGGGGCAAGACTTTTCTCTGGAGTTTGGTCTTGATGGAATTGCTGGCAGAAGAGTACCTGCTCCACCTGATTCACTTCGAAAGCCTGAAGGTAAGTTTGAATTCCGTAGGGAGAATGGCCATGTGAGATATGAAGATCTTACAAATATTTTGGGATTGAAGAGAATGGACTCTGAGAATCCTTTTGACATTGCTGACCTTACCTTTGCAAAAGAGCCAGCACAAGAGATGGAAAATGGGGCGTTTGTTGATTACTATAGCAAAAACCAAAAGGAAGATGGTAATATTATGCACGGATTGAGGAAGGCTATTGGTGAATCGGTTGGTGACCAAGCTGACGTTGGGACTTCTGGATCTCCCTTTCTCAGAAAAGAATCCTCCTATTCCAATGAGTTTGCTGGTTTAGGAGTGTCAGATGATTCTCAATCTGGGAAGATAAAGTTTCTATGCAGCTTTGGTGGGAAAATATTACCAAGGCCCAGTGATGGGAAACTCAGATTTGTAGGTGGAGAGACTCGCATGATATCTATCCCAAAGAACATTTCATGGGAAGAACTTGTTAAGAAGACCTTGGGTATTTGCAGGCAACCTCACACAATTAAGTACCAGCTTCCCGGGGAGGATCTTGATGCTCTAATATCTGTCTCCTCTGATGAGGATCTTCAAAATATGATAGAAGAATACCATGGGCCTGAGAGGCAAGAGGGATCTCAAAGACTTCGAATTTTCTTAATTCCATTGAGTGAATCTGAAAAGGAATCATCATTTGAGGCTAGCACTATTCAGCAGAGTGATCCTGATTACCAATATGTTGTTGCTGTGAATGGCATAGGAGACCATAATCCAAGAATAAGCATTCCTGGGCAGAGCTTGATAAATGAAGCTAGTCCATTGGGGACAAATTTGAACTTTGCTCCAGATTTTCAGAAAAGTTTTCCAAATGCACCTTCTTCAGAGATCAAGGGTGGTGGTAGTGGTAGTGCTATACATCCAGAAGGATTTTTTAGCGACTCCCAGAATCTGCTCAGGTCCTCCAATCAACATCAACCAATTTCTTTAAATCCATTTCAGGTAGGAAATTTAGGCACAGTTTATACACAATCTCAGGGTAATAACTCGTGCCAGGGAAGTGTGGAGAGCAGCTTATCCTTTATTACTGCCCAACTGCCACCTGAGCCCTCCAGCATAGGTGCTGCTGACAGCAGATACGCTCAACAAATGGCTGTGACTAGTCACCCTTCTCAACAAGCTGATTTTGGTCTGCCAGAGCAGCACTATCTAAGGCTGTTTGCAAACTACAATCCTGGCAAGGAATTTATGACTGCTTCATATACTAATCAAAGTGATGGTTGTAATGATGATATTTTGGGTGAGAGGTTCATGAATGAAGACATAAGTTTCCACACTGGAAATCCTCTTTCTGGCCTGGGTGAGTCAATTTGTGCACAGTCTGGATCTAATGGTGCTCCTGATTCTCTAACTGGGATACCTCATGCATTTTCTGATTCAAAGTTGCATGAGACTGGAACAAGGTCTAATTACTGTTCGCAGGAAGCAATCAGTCAATTTTCCTCATTGAACCTTTCAAAAGCTCAGTTATCTTCAATGGTAGGCGCTAGTGTTTCACAAAGGGACCATGTGGAAGTCCAGCATGATCCCAGTCTCATTTATCCGCACATACAAAGTAAGATACCATGTGTTGAGCCAGGTGAGTCGCACAGAAGGCGGGATTTGCCATTTTCTTCCCCATCAGCAGAATGTCTAGGAGCAAATGAGCCTGTTCAGAAGGATAGCATTTTTCACAATAAAAGGAATCCTTTAGCGCAAACTGATTTAAGTGTATCTAGCTTTATAGAGCGGCAGTGTGGAGATGATACTGTGACTATGGAAATGATGAAGAGAATTGCAGACAAGAATACTCTTCAGAGTGAGGATAGCAATGTTTGCAAGGGGAAATCACCTACCACTGTGATGGAGCATATAAATGAATTGCATCTCCTGGGCTCCTTCCCAGCTTCTAATTTAAATGTTAAGAGTAATCAACAAAAGCAATTAGAGCAATCTTCTGAGGATATGATTTCTGCATCTACAGGCATGATGGGAATTTCCCAAAATAATATGATTGATAAGACCCCATCAGGTTTTCCTGACATGAGCCCCAATTCTGACTTTAATCATTCTTCTCTAAAATTGGAAGGAAACTCTTGCGGCAAAACTTCTCTAGGTGATCATTTGTTCGAGCTGTCCATTGACTCAGTTTCTCATAAACATGCACAATTTAAACCTTCTTTTCAGAAGGATACAGGTCTCCATGAAGGTCCCACTGTAAGCTCTGCATTTTTGTATTCTTCAGCACTTCATGATGATCCAGGTCCAAGTTCAAATTTGCCTGTGAATGACCTAGAGAGCCCAAGCAAGAATATGGCATTTGATAGAGTACCTTCTCTCCTTGATGATGACTTTATAGCTAGTTCTGATCAAATGGTTGATCAGTTTAGCTGTGGAACCCTTGCCTGTGAAACAAAAGTTGAAGATACCATGATGGGGCTATCAAAAGATTTTGAAAAGTGTGATGGTTCAAATAATGTGGAGCCACTTATTACTATAGAAGATGTGACTGGTTTTGTTCCTTCGGGCATTGAGTCTTCTTTTGCGCCCCTCCCACCTAAAGTGGATGAAATTGGAAGTGATGTTTTATCCCCATCTGTAACAGAGGTGGAGAGCACCATCCCAGACTCTGAACCTGAGGATTTTAAAGATGATGAGGCAGACAAGAACGAATCCCTTACTGATGCAATGATAGCAGAAATGGAAGCCAGTATCTATGGGTTGCAGGTTGTCCATCACTAA 2991 0.4189 MELNKPEILLVANTRRTPGMSTQRTHVESACGVLKTGQVAHNNISIKPGQDFSLEFGLDGIAGRRVPAPPDSLRKPEGKFEFRRENGHVRYEDLTNILGLKRMDSENPFDIADLTFAKEPAQEMENGAFVDYYSKNQKEDGNIMHGLRKAIGESVGDQADVGTSGSPFLRKESSYSNEFAGLGVSDDSQSGKIKFLCSFGGKILPRPSDGKLRFVGGETRMISIPKNISWEELVKKTLGICRQPHTIKYQLPGEDLDALISVSSDEDLQNMIEEYHGPERQEGSQRLRIFLIPLSESEKESSFEASTIQQSDPDYQYVVAVNGIGDHNPRISIPGQSLINEASPLGTNLNFAPDFQKSFPNAPSSEIKGGGSGSAIHPEGFFSDSQNLLRSSNQHQPISLNPFQVGNLGTVYTQSQGNNSCQGSVESSLSFITAQLPPEPSSIGAADSRYAQQMAVTSHPSQQADFGLPEQHYLRLFANYNPGKEFMTASYTNQSDGCNDDILGERFMNEDISFHTGNPLSGLGESICAQSGSNGAPDSLTGIPHAFSDSKLHETGTRSNYCSQEAISQFSSLNLSKAQLSSMVGASVSQRDHVEVQHDPSLIYPHIQSKIPCVEPGESHRRRDLPFSSPSAECLGANEPVQKDSIFHNKRNPLAQTDLSVSSFIERQCGDDTVTMEMMKRIADKNTLQSEDSNVCKGKSPTTVMEHINELHLLGSFPASNLNVKSNQQKQLEQSSEDMISASTGMMGISQNNMIDKTPSGFPDMSPNSDFNHSSLKLEGNSCGKTSLGDHLFELSIDSVSHKHAQFKPSFQKDTGLHEGPTVSSAFLYSSALHDDPGPSSNLPVNDLESPSKNMAFDRVPSLLDDDFIASSDQMVDQFSCGTLACETKVEDTMMGLSKDFEKCDGSNNVEPLITIEDVTGFVPSGIESSFAPLPPKVDEIGSDVLSPSVTEVESTIPDSEPEDFKDDEADKNESLTDAMIAEMEASIYGLQVVHH 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0353 996 Pfam PB1 domain 209 291 IPR000270 GO:0005515
Dere12g0353 996 Gene3D - 211 293 - -
Dere12g0353 996 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 212 294 - -
Dere12g0353 996 SUPERFAMILY CAD & PB1 domains 208 296 - -
Dere12g0353 996 CDD PB1_UP2 196 292 - -
Dere12g0353 996 MobiDBLite consensus disorder prediction 360 382 - -
Dere12g0353 996 MobiDBLite consensus disorder prediction 949 973 - -
Dere12g0353 996 PANTHER OS05G0427100 PROTEIN-RELATED 187 495 - -
Dere12g0353 996 SMART PB1_new 207 294 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0353 Dere-ChrDere12 5974047 5977112 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0353 37 405 MAP Kinase Kinase Kinase AT1G04700 36.951 4.09e-50 190