Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0330 ATGGGTAACGGTATCGGAAAGGTCTGCCTCTGCTCCTGCGGCGCCGGAGAGATTTCCCGCCGTTACGAGACGCTGCCCTTCACCACCTCCAAACAGCACGAGAAATCTCTGGGAAATTCAATCTGTTATACCCGGCCGGACCCGTTTGGATTTTCGTCTTCCTCTAATATTTTCTCCGACGAGGATACCACCGCCCATATGACTTTCCGATCAATCTCCGGCGCCTCCGTGAGTGCCAACTCCTCCACCCCTCCTTCCATTTCTCTCGCCGATTCTTCTCAACAAGGAGGCTCTGCTTTTGACTCGACGGCGTCGTTTCAGTCCTCCCCTTCCTTCACTTCCATGCCCCTTCATCATCCTCCGCCACGTGGCTCCTCTGTTGGAAGCTCCGGCACGATGTCGAGTCCCATGGACAGGTGGTTCTCGTTGTCGGGTTCGGGTCCTATTGTGGGGTTTGAACCGAGATTGAATTGGAGCGCCATTGAAGAAGATGGGCAACAACACTACTCTGAATCTGAGAAATTCAAAAGGAGCTTATCTGATAACAAAAAAGGGTTTTCGAATACACCCAAAAATAGGTTAAAGAAGATTTACCGGCGAGCGATTTCCAGCGTCACGCCGATCAAAGGGGTGGTCTCAATCGGAGAATCCATTTCAGAGAAGAAAAATGACGATGGAGATGATGTTGAAAACGATGAAGGTTCTTCAATGGAGAGTAAGAATTTTCAATGGGCTCAAGGAAGAGCAGGGGAAGACAGAATCCATATCGTGATCTCCGAGGACTATGGTTGGGTTTTCGTGGGAATCTATGACGGATTTAACGGCCCAGATGCCACTGATTATCTCCTCAACAATCTCTTCTGCTCTGTTCTTAATGAGCTGAAAGAACTTCTCAGCAATAATGGCAATTCAGAATCCAAAAATGAAGACTCTTCGAGTCATTCTGATGTACTAAGAGCACTTTCGGAGGCACTAAGGAAGACAGAGGATGGGTTTCTGAAGGAGTCTGACGAGACACTAACGAAGAATCCAGTGTTGGCTATGATGGGTTCTTGTGTTTTGGTGATGTTAATGAAAGGAGACGATGTTTACTTGATGAATGTTGGGGATAGTCGAGCAGTTTTAGCTCAGAGTCCAGAGTATGATTTGAATTCTCTTCAGCTCACTATGGATCACAGTACGAACGTGAAAGAGGAGGTTCAGAGAATTAGGAGGGAACATCCAGATGATCCTTCTGCAGTAATTAAAGGAAGGGTGAAAGGTCACTTGAATGTCACAAGGGCTTTTGGCGCTGGTTTCCTCAAGCAGCCTAAACATAACAATGCAGTGTTGGAGACATTCAGAGTGGACTACAAAGGGGACTCACCATACATAATATGTTCCCCTTCACTCCATCACCACAGTCTCAGTCCAAGTGATAGATTCTTGGTATTGTCCTCTGATGGACTCTTTCAATATTTCACAAATGAAGAAGCAGTCTCCAAAGTAGATTCTTTCATCACTTTGTACCCAGAAAGAGATCCTGCTCAACTTCTCATTGAAGAAGCCCTATCTAGAGCTGCAACAAAAGCTGGTATGAATTTTCATGAGTTGCTTGAGATTCCACAAGGAGAACGTCGTTTATTCCATGATGATATTTCCATTGTCATAATCTCTGTGGAGGGAAAAATATGGCGTTCATCAGTGTAA 1689 0.4583 MGNGIGKVCLCSCGAGEISRRYETLPFTTSKQHEKSLGNSICYTRPDPFGFSSSSNIFSDEDTTAHMTFRSISGASVSANSSTPPSISLADSSQQGGSAFDSTASFQSSPSFTSMPLHHPPPRGSSVGSSGTMSSPMDRWFSLSGSGPIVGFEPRLNWSAIEEDGQQHYSESEKFKRSLSDNKKGFSNTPKNRLKKIYRRAISSVTPIKGVVSIGESISEKKNDDGDDVENDEGSSMESKNFQWAQGRAGEDRIHIVISEDYGWVFVGIYDGFNGPDATDYLLNNLFCSVLNELKELLSNNGNSESKNEDSSSHSDVLRALSEALRKTEDGFLKESDETLTKNPVLAMMGSCVLVMLMKGDDVYLMNVGDSRAVLAQSPEYDLNSLQLTMDHSTNVKEEVQRIRREHPDDPSAVIKGRVKGHLNVTRAFGAGFLKQPKHNNAVLETFRVDYKGDSPYIICSPSLHHHSLSPSDRFLVLSSDGLFQYFTNEEAVSKVDSFITLYPERDPAQLLIEEALSRAATKAGMNFHELLEIPQGERRLFHDDISIVIISVEGKIWRSSV 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0330 562 CDD PP2Cc 249 551 IPR001932 -
Dere12g0330 562 SMART PP2C_4 235 551 IPR001932 -
Dere12g0330 562 ProSiteProfiles PPM-type phosphatase domain profile. 234 553 IPR001932 -
Dere12g0330 562 SUPERFAMILY PP2C-like 249 554 IPR036457 -
Dere12g0330 562 MobiDBLite consensus disorder prediction 219 240 - -
Dere12g0330 562 MobiDBLite consensus disorder prediction 75 114 - -
Dere12g0330 562 PANTHER PROTEIN PHOSPHATASE 2C 225 551 IPR015655 GO:0004722|GO:0006470
Dere12g0330 562 MobiDBLite consensus disorder prediction 169 190 - -
Dere12g0330 562 Pfam Protein phosphatase 2C 264 523 IPR001932 -
Dere12g0330 562 MobiDBLite consensus disorder prediction 75 134 - -
Dere12g0330 562 Gene3D - 216 559 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0330 Dere-ChrDere12 5690803 5694039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0330 1 562 PP2C-type Phosphatase Gene Family AT2G28890 48.164 0.0 532
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g0330 12 5690803 5694039 Dere12g0330 12 5690803 5694039 ECH