Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0315 ATGGCAATGGATCCGAGTCTTCGGGGCCTTACCGATTCCAGAAGTGAAAAGCGATTGGGCAATCAATATATACCAATTCTGCAGCAGCATGAGAGATTTGAAAATGCCTTCTTTGATCACAGAAGGGAATTTGATTACCTGCGGCTGCAGTCTGATCAATTACCAAATAATACACCCTCTTCTTCTACTGTGACCCTTGAGGAGCATTCTCCAGAAGATTGTGATTTCTCTGATGCTGTTTTGAGTTACATAAATCAGATCCTGATGGAAGAAGATATGGAAGATAAGACGTGCATGCTTCAAGATTCTTTGGATCTTCAAGCAGCTGAGAAATCATTCTATGAGGCACTGGGTGAAAAATACCCTCCTTCACCTGTACAAAATTCAAGTCTTATTATCAATGGAAATGATGGGGGCACAGAAAATAATTTCCCCAGAAATTACAGACATTATCATAGTAATAACAATGGTAATTTCAACCAAACTTTCAATAATAATTCCTTGTTTCTAAACCCTAATGAGTTGACCTTTCAAGGTAATGGCATTTCTCAGTCACCTTATAGCTCTTCATATAGTGTTGTAAGTAGTGTAGAAGGGCCTTTGGAATCTCCAAGCAGTATTCTTCAAGTCCCGGATCTGAACAGCGAGAGCCAATCCATTTGGCAATTTAAGAAGGGTGTTGAGGAAGCTCGTAAATTTCTTCCTAGCGGGAACAGACTATTAGCTAATCTGGGTGTGACTAATTTAACACCAGAAGCGCCAAAGGCAGGGATTGATAAAATATCGGCCAAGGTCGAGATAGATGAAGGGGAGCATTTTCCTAGTGGATCAAAGAGAAGAAAGCAGCCTTACAGGGGAGAGAGTGACACTGAAGAAAAGAGGAGTAGCAAGCAAGCAGCAGTTTATACAGAACCAACTTTGCGGTCAATTATGTTTGATCTAGTGCTGCTTCATACTGACGGGGAAGGAAAGAACCATTTCATGGCTCGGCGAGAAGCTTTGCAGAACAAGACTACCATGGCGGTGATGCCAAATGGTCAATCAAAAGCTTCCAACACTGGAAAGGGGCGTGGGAAGAAACATAATGGGAGAAAAGCAGTGGTTGATTTGAGAACACTACTGGTTCTGTGTGCACAAGCTGTTGCAGCAGATGATCATAAGAGTGCACAAGAGTTGCTTAAGCAGATCAGGCAGCACTCGAATCCTTTCGGGGATGGAAATCAAAGGTTGGCTCATATCTTTGCTGATGGACTTGATGCCCGCTTGGCTGGTACCGGTAGCCAGATTTATAAGGGACTCGTCAGTAGAAAAAGGTCTGCTGCTGATCTACTGAAGGCTTATCATCTCTACCTTGCTGCATGCCCTTTTAGGAAGATTTCTAATTTTACCTCAAATGTCACAATAAGGATTTCTTCGGCAAACTCAATGAGGGTCCATGTTATAGATTTTGGTATTCTTTACGGTTTCCAGTGGCCTACTTTTATGCAGCGACTTTCAATGAGACCTGGAGGACCACCAAAACTACGAATCACAGGAATAGACTTTCCACAACCTGGTTTTAGGCCAGCAGAGAGAGTAGAAGAAACAGGACGCCGCTTGGCAGATTATGCAAAAGCCTTTAATGTGCCATTTGAGTATGTTGCCATAGCAAAGAAATGGGAAACTATTAAACTTGAGGAACTAAAGATTTGTAGGGATGAGTTCCTTGTTGTTAACTGTTTATATCGAGGTAAGAACTTGCTTGATGAATCTGTGGCAGTGGACAGTCCAAAGAATATTTTCCTCAATTTGATTCGGAAGATCAACCCAGATATATTCATTCATGGCATTATCAATGGAGCCTTTAATGCCCCCTTTTTTGTTACCCGCTTTCGGGAAGCTTTGTTTCACTATTCTTCTCTGTTTGATATGCTCGAAACAATTGTACCTCGCGAAGACTGGGAGAGGATGTTGATTGAGAAGGAGATATTTGGAAGGGAAGCACTAAATGTAATAGCTTGTGAGGGCTCTGAGAGAGTGGAAAGGCCAGAGACATATAAGCAGTGGCAAGCCCGTATTCTAAGAGCCGGGTTTATGCAGCTACCTTTTTCCCGTGAGATGGTGGAGAGGGCAATGAATAAAGTTAGGTCTAGCTACCATAAGGATTTTCTCATCCACGAAGATAGCCGGTGGTTATTACAAGGTTGGAAGGGGCGAATTATCTATGCCCTTTCTTGTTGGAAACCAGCATGA 2232 0.4247 MAMDPSLRGLTDSRSEKRLGNQYIPILQQHERFENAFFDHRREFDYLRLQSDQLPNNTPSSSTVTLEEHSPEDCDFSDAVLSYINQILMEEDMEDKTCMLQDSLDLQAAEKSFYEALGEKYPPSPVQNSSLIINGNDGGTENNFPRNYRHYHSNNNGNFNQTFNNNSLFLNPNELTFQGNGISQSPYSSSYSVVSSVEGPLESPSSILQVPDLNSESQSIWQFKKGVEEARKFLPSGNRLLANLGVTNLTPEAPKAGIDKISAKVEIDEGEHFPSGSKRRKQPYRGESDTEEKRSSKQAAVYTEPTLRSIMFDLVLLHTDGEGKNHFMARREALQNKTTMAVMPNGQSKASNTGKGRGKKHNGRKAVVDLRTLLVLCAQAVAADDHKSAQELLKQIRQHSNPFGDGNQRLAHIFADGLDARLAGTGSQIYKGLVSRKRSAADLLKAYHLYLAACPFRKISNFTSNVTIRISSANSMRVHVIDFGILYGFQWPTFMQRLSMRPGGPPKLRITGIDFPQPGFRPAERVEETGRRLADYAKAFNVPFEYVAIAKKWETIKLEELKICRDEFLVVNCLYRGKNLLDESVAVDSPKNIFLNLIRKINPDIFIHGIINGAFNAPFFVTRFREALFHYSSLFDMLETIVPREDWERMLIEKEIFGREALNVIACEGSERVERPETYKQWQARILRAGFMQLPFSREMVERAMNKVRSSYHKDFLIHEDSRWLLQGWKGRIIYALSCWKPA 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0315 743 ProSiteProfiles GRAS family profile. 361 741 IPR005202 -
Dere12g0315 743 MobiDBLite consensus disorder prediction 267 298 - -
Dere12g0315 743 MobiDBLite consensus disorder prediction 344 363 - -
Dere12g0315 743 Pfam GRAS domain family 370 741 IPR005202 -
Dere12g0315 743 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 292 735 IPR005202 -
Dere12g0315 743 MobiDBLite consensus disorder prediction 267 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0315 Dere-ChrDere12 5460304 5462535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0315 72 742 GRAS Transcription Factor Family AT2G37650 53.085 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dere12g0315 GRAS 7.5e-115 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g0315 12 5460304 5462535 Dere12g0315 12 5460304 5462535 ECH