Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0312 ATGGAGGAAGCTTTAATGGCTGCTTGGTCATCAGATGGGTCCTCAGAAGAAGACGACCTTCTGAGAGAGCTTCTAGACTATGGTTCTCCTCTTGTTGCAGTACCAGAAGAAGAGGCAATATATCAGAATCACCATACAAGAGCTTCAAGTGAAGAGCAAGCCATTATTAACAGGTTCATCTCCAACATCTACTCAGGGCCTACCATTGCAGATATTGAGAATGCTCTCTCAGTGACCAATCATAGAGACCATTTCCAAGAACTACCATCATCATCCAGAGTTTCCATACTGGAAAGAGGTTTAGATTTGAGCAAGATTGAGAATAAGTATACCTTGAAAATGAAGTGCTTTGGCAATGGGATGAGTGATGATGGATATAAGTGGAGGAAGTATGGACAGAAGTCTATTAAGAATAGCCCAAATCCTAGGAGTTACTATAGGTGCACAAACCCAAGGTGCAATGCCAAGAAGCAGGTAGAGAGATCCAATGAAGACCCAGACACTTTTATTGTCACCTATGAAGGGCTCCACCTACACTTTCCTTACCCATATTTTCTCATGGGCCAGCAAGGCCTTTCAGCCTCAAAGAAGCCCAAGACTACCTTTTCACAAGCCCAAGTCGAGGGGGAATCCCAGGAACCACATGTTCTTATGGGCCAACCGCGCACACAAGAAGCCCAGGAAGCCCAAGCTGATGCTACCTTCCACTGTTCAGAAGACATGGACCAAGAAAGCATGGGCCCACAAGGATTGCTTGAAGACATGGTGCCATTGACGATTCGGAACCCTAGTACCTCCAATAGTGTTCCCTCAAATTTTTCTTATTCTTCATAG 834 0.4484 MEEALMAAWSSDGSSEEDDLLRELLDYGSPLVAVPEEEAIYQNHHTRASSEEQAIINRFISNIYSGPTIADIENALSVTNHRDHFQELPSSSRVSILERGLDLSKIENKYTLKMKCFGNGMSDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCNAKKQVERSNEDPDTFIVTYEGLHLHFPYPYFLMGQQGLSASKKPKTTFSQAQVEGESQEPHVLMGQPRTQEAQEAQADATFHCSEDMDQESMGPQGLLEDMVPLTIRNPSTSNSVPSNFSYSS 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0312 277 Gene3D WRKY domain 111 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere12g0312 277 Pfam WRKY DNA -binding domain 123 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere12g0312 277 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 73 213 IPR044810 GO:0003700
Dere12g0312 277 ProSiteProfiles WRKY domain profile. 117 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere12g0312 277 SMART WRKY_cls 122 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere12g0312 277 SUPERFAMILY WRKY DNA-binding domain 119 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere12g0312 277 FunFam WRKY transcription factor 111 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0312 Dere-ChrDere12 5422649 5424589 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0312 2 269 WRKY Transcription Factor Family AT5G43290 42.143 1.19e-56 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere12g0312 WRKY 2.1e-26 CL0274