Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0282 ATGGAAGAAGATCAATGTTGGATGTGGACAAAGACAAAGCACTCATCTTTGAGCTCTAATATTCTTACCTCACCAGCCAAGAACTCCTCCTCTGGTGATTCATGGGAAGAACAAGCCTTTGCAGAAGATGAACGTGTTGGTGGGTGCATATGGCCTCCAAGATCATACTCTTGCAGCTTTTGCAGCAGAGAGTTCAGATCAGCCCAAGCTCTAGGCGGCCACATGAATGTTCACAGAAGGGATAGAGCTAGGCTAAACCAACCTCCAAGTCCACACAATAAGGATGAAACTACTCTTTATCCCCAAAATCCTTTCACATCTTCTTTCGGTTCCCTGTATTCAAACGCTAACCCTAATTCTGATCATCTTGATGTTCTTGCTTCCAAGGCTAAATTAGCTCCTCGATCGTCAATTCATGAGAATTCCCCACCGTATGAGACTTGTATTTCCTGGTCAAACTTTGCAGAAGAAAGATTATTTTCTCAGAAGTTCGATCTTATTGGAGCTGAGGATGTGTCAACGAGTTTAGATACTAATTGTAAGGAAGAAGCTGATATGAAAAGCTGCAAGAGGAGAAGAATAATAGCAGATGCTTCATCAATAATTCCATTCTTCTCAAAATCAGTTTCAGTTGATTCTAGGCATCTTCATATCAAGTCTCAGATGTTCGAGTTTATTAACCCTAGTTCCATTGAAGAACTAGATCTGGAGCTACGGCTTGGCCATAGTCCTCCCAAGGTATAG 744 0.418 MEEDQCWMWTKTKHSSLSSNILTSPAKNSSSGDSWEEQAFAEDERVGGCIWPPRSYSCSFCSREFRSAQALGGHMNVHRRDRARLNQPPSPHNKDETTLYPQNPFTSSFGSLYSNANPNSDHLDVLASKAKLAPRSSIHENSPPYETCISWSNFAEERLFSQKFDLIGAEDVSTSLDTNCKEEADMKSCKRRRIIADASSIIPFFSKSVSVDSRHLHIKSQMFEFINPSSIEELDLELRLGHSPPKV 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0282 247 MobiDBLite consensus disorder prediction 79 100 - -
Dere12g0282 247 Pfam C2H2-type zinc finger 56 80 - -
Dere12g0282 247 ProSiteProfiles Zinc finger C2H2 type domain profile. 56 83 IPR013087 -
Dere12g0282 247 ProSitePatterns Zinc finger C2H2 type domain signature. 58 78 IPR013087 -
Dere12g0282 247 SMART c2h2final6 56 78 IPR013087 -
Dere12g0282 247 SUPERFAMILY beta-beta-alpha zinc fingers 53 83 IPR036236 -
Dere12g0282 247 PANTHER OS07G0101800 PROTEIN 18 244 - -
Dere12g0282 247 Gene3D Classic Zinc Finger 53 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0282 Dere-ChrDere12 4754627 4755370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0282 1 247 C2H2 Transcription Factor Family AT5G06070 35.019 4.31e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dere12g0282 zf-C2H2_6 9.7e-07 CL0361