Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0265 ATGGCTCAGTCGTTGGGTCGGAGCAGTATGTTGGGAGACTACATCGTCGGAAGGCAAATCGGGTCCGGGTCTTTCTCGGTGGTATGGCATGGTAGACACCGAGTCCACGGAACCGAGGTGGCCATAAAAGAGATCGCCACCGTTCGGCTCAACAAGAAGTTGCAGGAGAGTCTCCTGTCGGAGATTTTTATTTTGAAACAGATCAACCATCCTAATATCATACGTTTGCACGATATAATTGAGGTTCCTGGGAAGATACATCTTGTGTTAGAGTACTGTAAAGGGGGTGATCTCTCTATGTATATCCAACGCCATGGAAGAGTTCATGAGGGAACTGCAAAGCACTTTATGCAACAGCTTGCTGCTGGCCTACAAGTTCTTCGAGACAATAATCTTATTCATAGAGATTTGAAACCACAGAATCTTCTTCTCACCGGAAATGATGACAAGTCTGTACTGAAGATTGCAGATTTTGGATTTGCAAGATCTTTGCAGCCTAGGGGCCTTGCAGAAACCTTGTGTGGTTCACCACTCTACATGGCTCCAGAAATCATGCAACTACAAAAGTATGACGCTAAGGCAGATCTCTGGAGTGTGGGTGCAATCTTATTTCAGCTTGTTACAGGAAGAACACCATATACTGGAAACAGTCAAGTACAGTTACTACAAAACATTGTGAAATCAACTGAATTATTATTCCCATCTGATAACCAATGTCTGAGTTCTGAGTGTAAAGACTTGTGTCAGAAATTGCTGCGCCGTAATCCAGTGGAACGGCTAACTTTTGAAGAATTTTTTAATCATCCATTTCTTCTTCTGAAGCAACCAGAACAGGATAAATCATTGAGGTATAGAAGTTCTTCAAGGACAATAGGTGAAATTCGTTTATCGGAGCATGATCCTTGGAGAGGGACCAAGGAAAATTATCAAGAGGATTGCTTACCTTTTCTCGTAGATGATGATTCTAGTGGTCTTGAGGGGAGCTCATCTTTTTCAAGGAAGAAGTCCTCAATAAAGTCTACCTATGGATTTAATCTAAATACACAACTAGATAAAGCAGACCTGGCATCTGCTACTCCTAGTAACATAAATATTACTTCCAGACAGCAACCTGAAGACAATACTATAAGGTTGGAGAGCCATAGAACCTCAGGAAGAAATCTCACTGATCCTCTAGAATCTCTGGAACAGAGATTGGCAAACACTTGTCCGAAAGTTGCAGACTCACTAGAGAATATTGATCAAGAGTATGTTCTTGTGTCTGGACCTCCTATGGATGTCTCATCATCTTCGTTGAGTTCGTCAAAGCCAAGCCATTTTCCCTATAGATCAGGTGGTTCCCCCCATGAGTCTTCTAATATAATTGGTAGAGTAAGTGCTCCAATGCCAATAATTGGTGTAGCTACCAGTAGCACATGTCAAATAGGAAGTTCAGAAAGTCAAGATTCTGCTCCAGGGACTTCACATGCATCAATGGATATGGGGGATGAACAGCCATCAGCTCACTGCATGACAAGGATAAAATCATTGCAACAGTGTGCATCTGCCATAACTGAATTAGTTAATGAAAAGATGGAGGCAGGAAAGCAACTGGAAGCATTCTCTATTCAGCTTGTTATTCTTGCAATTTGGAAGCAAGCACTGCATATATGCCATGCACAGGCTGCCTCAGCCATGGAAGGAAGTCCAAGTCTAGAAACTACAAAATCTAGGAGGAGCACCAGCATGAAGCATGGTAGTTCTGATTCAGAAGAATGCTTTGATGGAGACATGCAACAGCCAAAGGATATTTTAGCTCAAATTGAAAGTGAGTTTCTGAGGGAATTTGAGCATGCTGAAGAACTTGCTAAAGCTGTTGAGCCTGGAAATACAGAGATGCCAGACGCAATGGAGACAATATTTCAATCTGCCCTTGGTCATGGGAGACATGGGGGTGTGGACGAGCTCATGGGTGAAATGGAAAGTGCAGCTGCACTGTATTCAAAAGCTGTGCGATTATTGGTCTTCCTTCTAGTGGAAGCTCCATCCCTCATTCTCAATCCTCCATTTTCACTGACAAGCTCTGATCGATACAGGCTTCGGACATACATTGATATACTAAACAACAGGCAAGGTTATTCAAGGTCTCAGCGAATGACACTACTGAAGTGTGCCGAAACACAAGCCGACCTTAAGAACAAGTTTTAG 2187 0.4275 MAQSLGRSSMLGDYIVGRQIGSGSFSVVWHGRHRVHGTEVAIKEIATVRLNKKLQESLLSEIFILKQINHPNIIRLHDIIEVPGKIHLVLEYCKGGDLSMYIQRHGRVHEGTAKHFMQQLAAGLQVLRDNNLIHRDLKPQNLLLTGNDDKSVLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILFQLVTGRTPYTGNSQVQLLQNIVKSTELLFPSDNQCLSSECKDLCQKLLRRNPVERLTFEEFFNHPFLLLKQPEQDKSLRYRSSSRTIGEIRLSEHDPWRGTKENYQEDCLPFLVDDDSSGLEGSSSFSRKKSSIKSTYGFNLNTQLDKADLASATPSNINITSRQQPEDNTIRLESHRTSGRNLTDPLESLEQRLANTCPKVADSLENIDQEYVLVSGPPMDVSSSSLSSSKPSHFPYRSGGSPHESSNIIGRVSAPMPIIGVATSSTCQIGSSESQDSAPGTSHASMDMGDEQPSAHCMTRIKSLQQCASAITELVNEKMEAGKQLEAFSIQLVILAIWKQALHICHAQAASAMEGSPSLETTKSRRSTSMKHGSSDSEECFDGDMQQPKDILAQIESEFLREFEHAEELAKAVEPGNTEMPDAMETIFQSALGHGRHGGVDELMGEMESAAALYSKAVRLLVFLLVEAPSLILNPPFSLTSSDRYRLRTYIDILNNRQGYSRSQRMTLLKCAETQADLKNKF 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0265 728 FunFam Serine/threonine-protein kinase ATG1 6 312 - -
Dere12g0265 728 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 4 637 IPR045269 GO:0004674|GO:0006914
Dere12g0265 728 Gene3D Transferase(Phosphotransferase) domain 1 6 313 - -
Dere12g0265 728 MobiDBLite consensus disorder prediction 556 589 - -
Dere12g0265 728 ProSiteProfiles Protein kinase domain profile. 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g0265 728 MobiDBLite consensus disorder prediction 472 499 - -
Dere12g0265 728 CDD STKc_ATG1_ULK_like 20 270 - -
Dere12g0265 728 Pfam Protein kinase domain 15 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g0265 728 MobiDBLite consensus disorder prediction 427 449 - -
Dere12g0265 728 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Dere12g0265 728 MobiDBLite consensus disorder prediction 571 589 - -
Dere12g0265 728 SUPERFAMILY Protein kinase-like (PK-like) 11 418 IPR011009 -
Dere12g0265 728 MobiDBLite consensus disorder prediction 472 488 - -
Dere12g0265 728 FunFam Aurora kinase A 6 96 - -
Dere12g0265 728 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Dere12g0265 728 SMART serkin_6 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0265 Dere-ChrDere12 4511544 4519913 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0265 9 272 CBL-interacting serine-threonine protein kinases AT2G30360 35.926 4.93e-53 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Dere12g0265 Pkinase 5.6e-72 CL0016