Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0249 ATGGATCCTATGCCTATGCCTGATATGAAGATGCAGATGCAGATGAGCTTTTACTGGGGCAAAGATGCCATAGTCCTCTTCTCCAATTGGCCTAAGCACAGCCTTGGCATGTACATATTATCTACCTTCTTCGTCTTCGTTCTAGCCATGGCTTCCGAGCTTCTCTCTACCATCCCAAACCCCAAAAGAGGAACTAACCCTATTGTTGGAGGGTTGTCTCAGACTATTATCTATGCCTTTCGTATCAGCTTCGCTTATTTACTGATGCTCGCTGTTATGTCCTTCAACCTTGGGATCTTCATAGCCGTTGTGGCGGGCCACACCTTAGGATTCTTTATCGTTAAGTACCGAGGAACTGACTCCAATGGAAACCAGAACGGGTCCTCCATTATTATTCATAAAGTTTAA 408 0.4485 MDPMPMPDMKMQMQMSFYWGKDAIVLFSNWPKHSLGMYILSTFFVFVLAMASELLSTIPNPKRGTNPIVGGLSQTIIYAFRISFAYLLMLAVMSFNLGIFIAVVAGHTLGFFIVKYRGTDSNGNQNGSSIIIHKV 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0249 135 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 5 123 IPR007274 GO:0005375|GO:0016020|GO:0035434
Dere12g0249 135 Pfam Ctr copper transporter family 15 56 IPR007274 GO:0005375|GO:0016020|GO:0035434
Dere12g0249 135 Pfam Ctr copper transporter family 67 113 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0249 Dere-ChrDere12 4269425 4269832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0249 13 126 Inorganic Solute Cotransporters AT5G59040 45.299 1.52e-27 97.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g0249 12 4269425 4269832 Dere12g0249 12 4269425 4269832 ECH