Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere12g0244 | ATGTCTTTGAAAATGTCATCAACTACACAGATTTCCCGTGTAGATTTGGAGCAGGGAAGCCACCATAGTGACATGAGTGCTGAGGCCAGTGTTTGCTTCTCTGATGCTGAAGATGGTTCTTGCTATTCCTATTTCTACTCAACAAATGGTGGCTCAATCGATGGGTATAGCTTCGCTTGTGTTTCTGATACTGAAGTCATTGAGGAGGGTGTTCCTGATTCTGGGAGAGCTTCTTCCGTTACTGAATGCTCAATGGAGGTGGAAATTGAAAGTGGGGTTCCTGAAATTAAGGTGCATTTGGCTAAAGTAGAGAGAGATTGTAGGATTTGTCACATGGGTTTGGAGAGTGATAGCCAGGAATCTGGGGTTCCAATTCAATTGGGTTGTTCTTGCAAGGATGATCTAAGTGCTGCTCATAAAATCTGTGCTGAGACCTGGTTCAAGATTAAGGGGAACAGGACCTGTGAGATCTGTCATTCTGTGGCACAGAATGTTTATGGAGTGAATGAGGAGACAACGGAGAATTTAAGTGACAGCAACAATGCTACTGCAGTATCCACAACTCCGGCAGTGGCTCCATCAACAGAAGCTAGAAGATTTTGGCAAGGCCATCGCTTCCTGAATTGCCTGCTTGTTTGTATGGTTATTGCATTTGTCATATCCTGGCTTTTTCACTTCAAGGTGGGATCATCTTAG | 696 | 0.4411 | MSLKMSSTTQISRVDLEQGSHHSDMSAEASVCFSDAEDGSCYSYFYSTNGGSIDGYSFACVSDTEVIEEGVPDSGRASSVTECSMEVEIESGVPEIKVHLAKVERDCRICHMGLESDSQESGVPIQLGCSCKDDLSAAHKICAETWFKIKGNRTCEICHSVAQNVYGVNEETTENLSDSNNATAVSTTPAVAPSTEARRFWQGHRFLNCLLVCMVIAFVISWLFHFKVGSS | 231 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere12g0244 | 231 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Dere12g0244 | 231 | SUPERFAMILY | RING/U-box | 104 | 162 | - | - | |
Dere12g0244 | 231 | SMART | ringv_2 | 106 | 159 | IPR011016 | GO:0008270 | |
Dere12g0244 | 231 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 99 | 165 | IPR011016 | GO:0008270 | |
Dere12g0244 | 231 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
Dere12g0244 | 231 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 95 | 168 | IPR013083 | - | |
Dere12g0244 | 231 | PANTHER | ZINC FINGER, RING-CH-TYPE | 20 | 228 | - | - | |
Dere12g0244 | 231 | Pfam | RING-variant domain | 107 | 158 | IPR011016 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere12g0244 | Dere-ChrDere12 | 4120080 | 4123238 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere12g0244 | 47 | 231 | C3H Transcription Factor Family | AT5G05830 | 53.763 | 1.43e-64 | 197 |