Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0229 ATGGCTTCAAATACTATAGCTGGAAGTCATTGCCCATCACCCATGAAGCCTACGTCCAATGGAGTCTTTCAAGGAGATAGTCCTCTTGATTATGCTCTCCCTCTCGCCATCTTACAAATCTGCCTTGTCGTTATCGTTACGCGTATTCTCGCTTTTCTTCTCAAGCCATTAAGACAGCCTCGTGTGATTGCAGAGATTGTTGGTGGAATAATACTAGGCCCATCAGTTTTGGGCCGTAATAAAAGGTATTTGAATGCATTATTTCCCTCCAAAAGCCTCACAGTGTTAGATACTTTGGCCAATCTTGGTCTACTTTTCTTTTTGTTCCTTGTGGGGCTTGAGCTAGATCCAAGGTCCCTTCGTCGAACTGGAAAGAAAGCTCTTGGCATTGCTCTTGCCGGCATTAGTCTCCCATTTCTGTTGGGAATTGGAACATCATTTGCTCTTCGTGCAACTATTTCAGAAGGTGTCAGTAAAGCTCCTTTCCTTGTATTCATGGGAGTGGCTCTTTCCATCACTGCATTTCCTGTGTTGGCTCGTATTTTGGCTGAGCTCAAGCTTCTAACCACCGATGTTGGCCGAATAGCCATGTCTGCAGCAGCTGTCAATGATATTGCCGCATGGATTCTGCTTGCTCTTGCTGTTGCCCTTTCTGGCACTACACATTCTCCCCTTGTTTCCCTCTGGGTATTATTGTGTGGTTGTGGTTTTATACTGTGTTGCATACTTATCCTCCCTCCTATATTTAAATGGATGGCTAAACGTTGCCACGAAGGCGAACCAGTTCAAGAACTATACATCTGTGCCACATTAGCTGCAGTTCTGGTTGCTAGTTTTGTTACTGATACTATTGGGATTCATGCCCTCTTTGGTGCATTTGTGGTTGGACTTCTTGTGCCAAAAGAAGGGCCCTTTGCCGGAGCTCTTGTTGAGAAAGTGGAGGATCTTGTGTCTGGCCTCTTACTTCCATTATACTTCGTATCTAGTGGATTGAAGACAAATGTGGCCACTATTGTAGGGGCTCAGTCATGGGGTCTTCTCGTTTTAGTCATATTTACAGCTTGTTTTGGTAAGATTGTTGGCACCCTACTTGTCTCCTTCCTCTGTAGAGTACCTTTGAAGGAGTCTCTGGCTCTTGGCTTCCTCATGAATACTAAAGGATTAGTGGAGCTCATTGTTCTTAATATTGGTAAAGAAAGAAAGGTATTGAATGATCAAACATTTGCTATCATGGTACTAATGGCCATCTTCACAACCTTCATCACAACGCCTTTAGTTATGGCAGTATATAAACCAGCCCAAAGGAGGTCGAAAGTTGATTATAAACATAGAGCTGTTGAGAGGAAAGACCCAAACACTCAGCTTCGGCTTTTGGTATGTTTTCACAGTACAAGGAACATCCCGTCAATGTTGAATCTAATTGAAGCTTCACGCGGCACTGGAAAGAGAGAAAGGCTCTGCCTATATGCATTGCATCTCACGGAACTCTCAGAGAGGTCATCAGCTATAATGATGGTTCACAAGGCCAAGAAGAATGGTTTACCTTTTTGGAACAAAACCCCACACTCCAATGCCAATCAAATCGTAGTTGCTTTTGAGGCTTTCGAGCAGCTTAGCCGAGTGTCTATACGTCCCATGATAGCAATCTCTGCTATGTCTGACATTCATGAGGACATATGCGAATGTGCTGAGAGGAAAAGAGCAGCAATGATAATCATCCCATTTCACAAGCACCAAAAGGTGGATGGCACATTGGAAACAACTCGAACTGAATCCAGGTCTGTCAACCGGAGGGTTCTAGAACACGCACCATGCTCAGTAGGGATCTTAGTAGACCGTGGACTTGGTGGAAGCACCCATATAGCAGCAAGTAATGTTTCTTCCACAGTGACAGTGCTATTCTTTGGGGGTCCTGATGATAATGAAGCTCTAGCATATGGTCTGCGTGTGGCAGAACATCCTGGTATAAGATTAACCGTAGTTTGCTTTCTAGTGGGAAGCTCAGAAAATGGAGGAGAGATTCGAAGTGTTGATATAAACGTGGAGCCATTAAATAGAATGGAAGGATCTACAGATGATCAGAAATTTCATGAAGAAGTGAGACAGAAGACGTCAAACAACAACTCGGTGAAATTTGAAGAGAGAAGGGTCAAGAACTGTGCAGAAATTGTAGAGGTGGCTAAGGAATACAGTAGATGCAATTTGTTTTTGGTAGGTAGGATGCCTGAAGGTGAAGTAGCAATGGCTTTAAATAATAGTGTGAAGGTTGAGTGCCCAGAATTGGGTCCAGTTTGCAATCTCCTAACCTCTCCAGAGTTTTCAACCTCTGCCTCAGTGTTGGTGGTGCAGCAATATCGGGGTCAAAAAATGGTCATACCTAAGGAGGAAGACTGA 2394 0.4386 MASNTIAGSHCPSPMKPTSNGVFQGDSPLDYALPLAILQICLVVIVTRILAFLLKPLRQPRVIAEIVGGIILGPSVLGRNKRYLNALFPSKSLTVLDTLANLGLLFFLFLVGLELDPRSLRRTGKKALGIALAGISLPFLLGIGTSFALRATISEGVSKAPFLVFMGVALSITAFPVLARILAELKLLTTDVGRIAMSAAAVNDIAAWILLALAVALSGTTHSPLVSLWVLLCGCGFILCCILILPPIFKWMAKRCHEGEPVQELYICATLAAVLVASFVTDTIGIHALFGAFVVGLLVPKEGPFAGALVEKVEDLVSGLLLPLYFVSSGLKTNVATIVGAQSWGLLVLVIFTACFGKIVGTLLVSFLCRVPLKESLALGFLMNTKGLVELIVLNIGKERKVLNDQTFAIMVLMAIFTTFITTPLVMAVYKPAQRRSKVDYKHRAVERKDPNTQLRLLVCFHSTRNIPSMLNLIEASRGTGKRERLCLYALHLTELSERSSAIMMVHKAKKNGLPFWNKTPHSNANQIVVAFEAFEQLSRVSIRPMIAISAMSDIHEDICECAERKRAAMIIIPFHKHQKVDGTLETTRTESRSVNRRVLEHAPCSVGILVDRGLGGSTHIAASNVSSTVTVLFFGGPDDNEALAYGLRVAEHPGIRLTVVCFLVGSSENGGEIRSVDINVEPLNRMEGSTDDQKFHEEVRQKTSNNNSVKFEERRVKNCAEIVEVAKEYSRCNLFLVGRMPEGEVAMALNNSVKVECPELGPVCNLLTSPEFSTSASVLVVQQYRGQKMVIPKEED 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0229 797 Gene3D - 35 440 IPR038770 -
Dere12g0229 797 FunFam Cation/H(+) antiporter 15 35 437 - -
Dere12g0229 797 Pfam Sodium/hydrogen exchanger family 41 425 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Dere12g0229 797 Gene3D - 482 759 - -
Dere12g0229 797 PANTHER CATION/H + ANTIPORTER 10 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0229 Dere-ChrDere12 3939606 3942364 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0229 1 787 Antiporter Super Family AT5G41610 69.571 0.0 1090