Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0207 ATGGCCGAGGAACCCATGAAATCAGCTGAGCAAGTGGTGGTAGGGGCAGAGGAACCTATCGCTAAGAAGCCCATTGCCAAGAAAGAACCAGCTGAGCCGATGGCATCCACTGAAGAAGTGGTGGAGGCAGAGAAACCCAAGAAGGACATCATACCAGTCGAGTCGGAAGAGAAGATTAGTCAATCAATGTCTTTCAAGGAAGAGAGCAATGTGGTCGATGAAGTGGTTCGAGTACTCACAAACACCTTCGAAACCAAAAGTTGCCTACACATGCTCTCCTATGGTCCACCCGGCACTGGGAAGACCACAACTGCACTTGCAATCACCCATCAGCTTTTCGGGCCTGAGCTTTACAAGTCTAGAGTGTTGAAGCTGAATGCAAGTGATGATCGTGGAATTAATGTTGTGCAGACAAAGATTAAGGATTTTGCTGTTGTGGCTGTCGATACCAGTCAGCATAAGAATGGTGATGGAAGGCAAGGTTGGGTGAAGTTTGCTCCATACAATGTCATTCACGTTAAAGTAGCAACACCAAAAATTTTGGAAGCGTTTACCGAGCAGTACTAG 567 0.4691 MAEEPMKSAEQVVVGAEEPIAKKPIAKKEPAEPMASTEEVVEAEKPKKDIIPVESEEKISQSMSFKEESNVVDEVVRVLTNTFETKSCLHMLSYGPPGTGKTTTALAITHQLFGPELYKSRVLKLNASDDRGINVVQTKIKDFAVVAVDTSQHKNGDGRQGWVKFAPYNVIHVKVATPKILEAFTEQY 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0207 188 MobiDBLite consensus disorder prediction 21 47 - -
Dere12g0207 188 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 144 187 - -
Dere12g0207 188 Pfam ATPase family associated with various cellular activities (AAA) 91 139 IPR003959 GO:0005524|GO:0016887
Dere12g0207 188 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 71 154 - -
Dere12g0207 188 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 156 171 IPR000682 GO:0004719|GO:0036211
Dere12g0207 188 Gene3D - 56 171 IPR027417 -
Dere12g0207 188 CDD AAA 73 145 - -
Dere12g0207 188 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 73 146 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0207 Dere-ChrDere12 3580075 3581066 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0207 73 156 Core DNA Replication Machinery Family AT1G21690 70.238 4.88e-34 121