Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0195 ATGGTAAGAAAACGTCCGATCAGGCACAGGCTTGGTTTCATTAACCAGTTGTTTGCCAACTCCTGCCAAACGGTCAATCGTCTAAGCTTCGTCCTCATCATCGTTCTGATTCAAATTTGGAGATCCGGTTCCATTGTAGACAAACTAATAGGATACAGAAAATTTCACCTTCAAAACGAGCGTGCTACCAGAGCAGACATCGCTGAAACTCTAATAGCATACCACAAGATCGTGTGGGAGGGCACCGCCACACCAGAAAGGTCAAGAACAGGGCGTGACGTTCAGTATATTTGGACGGTAGAGAAGTGGGTCGTCCCTGTTCCCCTTCACTCATCGTCCTCATGCATTGAATTCAAACTTGTGGCCTCTTTCTCAACGCCTGAACTAAAAGATTTGAATCTTTATGATTTAGGATTTGACAAGGGTGCGAAATTTTCAGAGGCTAAAGCAAAGGAAAGGAGATCATCAGAGGAAATGGAGGGGAAGGACGAAGATGTGAGGGTAGGAGCCAACAGGTACAGAGAGAGGCAGCCAATAGGAACGGCGGCTCAGTCCCAAGCCGCCGACGGCAGAGACTACAAGGAGCCTCCTCCGGCGCCTTTGTTTGAGCCCGGCGAGCTCTCCTCTTGGTCCTTCTACAGAGCAGGCATTGCAGAGTTCGTCGCCACTTTCTTGTTCCTCTACGTCACCGTTTTGACTGTCATGGGGGTCGCCAATTCCCCCTCCAAGTGCTCCACTGTGGGCGTTCAAGGCATCGCTTGGGCCTTCGGTGGAATGATCTTTGCTCTTGTCTACTCCACTGCTGGCATCTCTGGAGGCCACATTAACCCTGCAGTGACATTTGGGCTGTTGTTGGCAAGGAAGCTGTCACTAACAAGAGCAGTGTTCTACATAATAATGCAGTGCTTGGGAGCCATATGTGGAGCTGCAGTGGTGAAGGCATTCCAACCTCGTACCTACGAGACTGTTGGTGGTGCAGCCAACACTCTCACTTCCGCCTACTCCAAAGGCAGTGGCCTTGGAGCTGAGATTGTTGGCACTTTTGTTCTTGTCTACACTGTCTTCTCTGCCACTGATGCCAAGCGAAATGCCAGAGACTCCCACGTCCCTATCTTGGCTCCACTGCCTATTGGGTTTGCTGTGTTTCTGGTGCATTTGGCTACAATTCCTGTCACAGGGACAGGTATCAACCCTGCTAGAAGTCTTGGTGCTGCTCTTATCTACAACAGGGCCAATGTTTGGGATGACCATTGGATCTTCTGGGCAGGACCTTTCGTTGGGGCAGCTCTTGCAGCTTTGTACCATCAGGTAGTGATAAGGGCTATCCCCTTCAAGTCAAAGTGA 1344 0.5022 MVRKRPIRHRLGFINQLFANSCQTVNRLSFVLIIVLIQIWRSGSIVDKLIGYRKFHLQNERATRADIAETLIAYHKIVWEGTATPERSRTGRDVQYIWTVEKWVVPVPLHSSSSCIEFKLVASFSTPELKDLNLYDLGFDKGAKFSEAKAKERRSSEEMEGKDEDVRVGANRYRERQPIGTAAQSQAADGRDYKEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYVTVLTVMGVANSPSKCSTVGVQGIAWAFGGMIFALVYSTAGISGGHINPAVTFGLLLARKLSLTRAVFYIIMQCLGAICGAAVVKAFQPRTYETVGGAANTLTSAYSKGSGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPVTGTGINPARSLGAALIYNRANVWDDHWIFWAGPFVGAALAALYHQVVIRAIPFKSK 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0195 447 CDD MIP 214 438 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere12g0195 447 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 171 443 IPR034294 -
Dere12g0195 447 SUPERFAMILY Aquaporin-like 207 440 IPR023271 -
Dere12g0195 447 FunFam Probable aquaporin PIP1-2 199 447 - -
Dere12g0195 447 ProSitePatterns MIP family signature. 274 282 IPR022357 -
Dere12g0195 447 MobiDBLite consensus disorder prediction 150 198 - -
Dere12g0195 447 NCBIfam MIP family channel protein 218 435 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere12g0195 447 Pfam Major intrinsic protein 206 435 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere12g0195 447 MobiDBLite consensus disorder prediction 150 172 - -
Dere12g0195 447 Gene3D Glycerol uptake facilitator protein. 199 446 IPR023271 -
Dere12g0195 447 PRINTS Major intrinsic protein family signature 418 438 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere12g0195 447 PRINTS Major intrinsic protein family signature 342 360 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere12g0195 447 PRINTS Major intrinsic protein family signature 214 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere12g0195 447 PRINTS Major intrinsic protein family signature 293 312 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere12g0195 447 PRINTS Major intrinsic protein family signature 256 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere12g0195 447 PRINTS Major intrinsic protein family signature 378 400 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0195 Dere-ChrDere12 3444193 3451777 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0195 159 447 Major Intrinsic Protein MIP AT4G23400 82.699 3.92e-170 477