Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0186 ATGGGTTCTTACGAAGAAGAATGCCTCTTGGAGAGTAACTACCGCACGGCATCGAGCAAGGGCATGAGGCTTGGTCGCCTCCCGCACAAGAAGTCCGCCTCCTGCTTGCGGAAGAAGTCTGATTTTAGCTTAGCATCGAAGATTCACGGCGGGTTTCTGAAAGATTTTTTGGAGAACCTTGTAGAGATTTTTCTGGGTACCCAGCTTTCGATTCTGTTCATAGGGGTTCCGCTTGCCATCGTTGCCGATTGCTATGGTCTTGGACGGGTCAGTAATGTTTTCATTTTGTTTGATGTAAATGTGGTTGTTTGGCAGATGAGAAGAAGAATATCCTGGGTTTTCTTGTTGAGCCTTATTGGACTTACAGCACTTTCTGAACGCGTCAGCTTCTTGACTGAACAAGTTGCTTATTACACAGGTCCCACAGTTGGGGGGCTTCTGAACGCAACATGTGGCAATGTTACAGAGCTTATAATAGCAATATTTGCTCTTAAACATAATAAGATAGATGTGGTCAAGTATTCTCTCCTGGGTTCCATCCTTTCAAACCTTCTTCTGGTTCTTGGAACCTCTCTATTCGTAGGTGGCCTTGCAAACCTTAGACTGCAACAAAAATATGATAGAAGACAAACAGACGTGAACTCACTTATGATGCTGCTTGCATTTTTCTGTTACTTCCTGCCAATGCTCTTCAGATTTGCCAGTAACTCGGATGCTCTAACTACAGTCCCATCTCTTCAATTTTCAAGGGCTGCTAGCATTGTGATGCTGATAGCATACTTGGCTTACCTTGTCTTCCAGCTGCGGACACATTGCCAAATATTTGAACCTAATATTGAAGACGAAGATGATGACACCATGTCAGCAGAAACAGCAGTGATAGGATTCTGGAGTGGGTTTGCTTGGCTGGTAGGAATGACTCTGTTTATAACTATCTTGTCTGAATACGTGGTGGGGACAATTGAGCATGTATCAGATTCATGGGGCTTGTCTGCTAGCTTCCTAAGCATAGTCTTGCTACCAATAGTTGGCAACGCAGCTGAACATGCAGGAGCAATAATATTTGCTTTGAGGAATAAACTGGATATCTCATTGAGTATTTCCTTGGGTTCTGCAACTCAAATTGCCATGTTTGTGGTTCCCCTTTGTGTGATTGTTGCTTGGCTAATGGGCATCAATATGGACCTTAACTTTAATCTCTTGGAGACCAGCTCTCTTGCTCTGGCAATAATGGCCACGTTCTTCTCCTTACAGGATGGAACTTCTCATTACTTGAAAGGCCTTATTCTCCTGCTCTGCTATATTATTATCGGGGCATGCTTTTTCTTGCAAACAACCTCGATATGAAGGAGATCCTTCCCTGAGATGAATGACAGCAACATCCATAGTTAA 1392 0.4353 MGSYEEECLLESNYRTASSKGMRLGRLPHKKSASCLRKKSDFSLASKIHGGFLKDFLENLVEIFLGTQLSILFIGVPLAIVADCYGLGRVSNVFILFDVNVVVWQMRRRISWVFLLSLIGLTALSERVSFLTEQVAYYTGPTVGGLLNATCGNVTELIIAIFALKHNKIDVVKYSLLGSILSNLLLVLGTSLFVGGLANLRLQQKYDRRQTDVNSLMMLLAFFCYFLPMLFRFASNSDALTTVPSLQFSRAASIVMLIAYLAYLVFQLRTHCQIFEPNIEDEDDDTMSAETAVIGFWSGFAWLVGMTLFITILSEYVVGTIEHVSDSWGLSASFLSIVLLPIVGNAAEHAGAIIFALRNKLDISLSISLGSATQIAMFVVPLCVIVAWLMGINMDLNFNLLETSSLALAIMATFFSLQDGTSHYLKGLILLLCYIIIGACFFLQTTSIXRRSFPEMNDSNIHS 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0186 463 Gene3D - 141 442 IPR044880 -
Dere12g0186 463 NCBIfam calcium/proton exchanger 101 442 IPR004798 GO:0006816|GO:0015369
Dere12g0186 463 FunFam Vacuolar cation/proton exchanger 287 443 - -
Dere12g0186 463 NCBIfam calcium/proton exchanger 54 442 - -
Dere12g0186 463 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 30 444 IPR004713 GO:0006812|GO:0008324|GO:0016020
Dere12g0186 463 Pfam Sodium/calcium exchanger protein 112 268 IPR004837 GO:0016020|GO:0055085
Dere12g0186 463 Pfam Sodium/calcium exchanger protein 299 437 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0186 Dere-ChrDere12 3279413 3283104 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0186 17 444 Antiporters AT2G38170 61.343 1.37e-176 501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g0186 12 3279413 3283104 Dere11g0184 11 3057113 3061508 CCT
Dere12g0186 12 3279413 3283104 Dere12g0186 12 3279413 3283104 ECH