Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0185 ATGGGTAGTATTCAACAAGAGCCATTGCTCTTGGAGAACGGCAACATCAAGGGTTTGAGCAAGGAGTTGAGGCATGGCCGAACCGCCCATAACATGTCCTCTTCTTCGTTGCGCAAGAAGTCTGACCTCACCCTTGTTTCCAAGATCCGATATGGGTTGCTCAGGAATTTGCTCGTCAATTTTCAGGAGGTCACTCTTGGGACCAAGCTCTCGATTCTCTTCCCTGCGATTCCCCTCGCCATTGTCGCCGAAGTCTATAGGTTTGGTCGACCATGGGTTTTTGCGTTGAGCTTACTTGGACTAACACCACTTGCAGAACGTGTCAGCTTTTTGACAGAACAAGTTGCTTATTACACAGGTCCCACAGTTGGAGGACTTTTAAATGCAACATGTGGCAATGTCACAGAGCTCGTAATAGCAATAGTTGCTCTCAGCAATAATAAAATAACTGTGGTCAAGTACTCTCTCTTGGGTTCAGTCCTTTCAAACCTTCTTCTGGTTCTTGGAACCTCTCTCTTCTGTGGAGGAATAGCAAACATTAGAGTAGAACAAAAGTATGAGAGAAAACAGGCAGATGTGAACTCACTTATGCTGCTGCTGGCATTATTGTGTCACTTGCTGCCTATACTGTTCAGATATTCTGGTGCTTCGGCTGCTCTCGCTACAGACCCATCTCTCCACTTGTCAAGAGCTGCAAGCATTGTGATGCTGATTGCATATTGTGGTTACCTTGTCTTTCAACTTTGGACACACCGCCAATTATTTGAAGCTGAGGATGAAGAAGACGACGATGATAATGTTGCAGAAGGAGCAGTGATAGGATTCTGGAGTGGGTTTGCTTGGTTGGCTGGAATGACTGTGCTCATTGCTATCTTGTCTGAATTTGTGGTGGACACAATTGAGGGTGCTTCGGAATCGTGGAGCTTGTCTGTTAGCTTCCTTAGCATAATCTTGCTGCCAATAGTTGGCAATGCAGCTGAACATGCAGGAGCAATCATATTTGCTTTCAAGAACAAGCTGGACATCTCATTAGGTGTTGCTTTAGGTTCAGCGACTCAAATTTCCATGTTTTTGGTTCCTCTTTGTGTGGTTATTTCTTGGATAATGGGTATCAAAATGGACCTCAACTTCAATCTACTTGAGACTGGTTCTCTTGCCTTGGCAATTTTAGCCACAACCTTCACATTACAGGATGGGACTTCTCACTACATGAAAGGCCTTATTCTCCTGCTCTGCTACATTGTTATTGGGGCATGCTTTTATGTTCAAAGAACACCGCTTAACCAAGCTGATGTTACCAACATGATCCTTAAACCTACAACTGAAGCAGTTTTCAGAGCTTAG 1344 0.4442 MGSIQQEPLLLENGNIKGLSKELRHGRTAHNMSSSSLRKKSDLTLVSKIRYGLLRNLLVNFQEVTLGTKLSILFPAIPLAIVAEVYRFGRPWVFALSLLGLTPLAERVSFLTEQVAYYTGPTVGGLLNATCGNVTELVIAIVALSNNKITVVKYSLLGSVLSNLLLVLGTSLFCGGIANIRVEQKYERKQADVNSLMLLLALLCHLLPILFRYSGASAALATDPSLHLSRAASIVMLIAYCGYLVFQLWTHRQLFEAEDEEDDDDNVAEGAVIGFWSGFAWLAGMTVLIAILSEFVVDTIEGASESWSLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQISMFLVPLCVVISWIMGIKMDLNFNLLETGSLALAILATTFTLQDGTSHYMKGLILLLCYIVIGACFYVQRTPLNQADVTNMILKPTTEAVFRA 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0185 447 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 24 425 IPR004713 GO:0006812|GO:0008324|GO:0016020
Dere12g0185 447 Pfam Sodium/calcium exchanger protein 278 416 IPR004837 GO:0016020|GO:0055085
Dere12g0185 447 Pfam Sodium/calcium exchanger protein 92 249 IPR004837 GO:0016020|GO:0055085
Dere12g0185 447 FunFam Vacuolar cation/proton exchanger 266 422 - -
Dere12g0185 447 NCBIfam calcium/proton exchanger 75 421 IPR004798 GO:0006816|GO:0015369
Dere12g0185 447 NCBIfam calcium/proton exchanger 56 421 - -
Dere12g0185 447 Gene3D - 121 260 IPR044880 -
Dere12g0185 447 Gene3D - 266 421 IPR044880 -
Dere12g0185 447 FunFam Vacuolar cation/proton exchanger 121 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0185 Dere-ChrDere12 3273636 3277150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0185 1 429 Antiporters AT2G38170 69.021 0.0 588