LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere12g0175	ATGACAGAGTGGAGGCCTAGAACAAAAAAGTCAAGGAAGTCGGTGCAGCGTGGGAGGGAAAGGGCGGAAATTCCAAAAGTGGGGACCACAAGATGGTCAATGTCAGAAGCCCAAAAATTGAAAGGCGAAGGCAAAGTCAGCAAGTTCGGCATCTCCTTCTCCTTTGTATCAAAACGGCAACGCATCTTTTACACGTACCTTCCCCTACCTCCTTTTCTCGTGCCTTTATGCCTAGTTGCCTACCATACTAGTCAGAGTCAACATATACCTGTGCTTCTCCTAGTACAGCAGTCTTCTTCTTCTACCTCCATAAGTAGCCACTTCCCGTTAGGCTGTGTTTGGAAGATTGGCATTATGGCCGATCAACAAGACCTCGCAAAATCAGGATGCTTCTCTCGCTTCGTACGCGTCCTTCTCTGTGCTCACTCCAACAATGCTCCTCCTATCCACCCTTCAGATCGCCTCCCTCAACCTCCTCCCTCCCAAACACTCTCTTCCCACCCAAACAAACCCCCATTCGCGCCTACTCCCGTTCCTGCTACCCCTGGAGTAGTCGCCAAGTTGATGGGCTTAGACTCGCTTCCAAACACCTCTCGGGGCTCCAAAGGGGTCTCCCCGCATTCGGTTCCCAGAAGTAGGTCTGTGAACTTCGTCGATTACTTGCTCCAGTTCGACCCGACCCACCAAGAAGGCACTCATCGTCGCGTCAGAACCTCGTCGTCGTTTCGCGAGGTCCCTGCGTCGTCCTCGTCGTTGACGGCTCTGTCGTTTCAGCAGCAGAAGAAGAACCACGAGGTTGTCGTTTTCTTCTGGGACGAGAACGATGCGAGCAGATCGAAGTCTAGTGAGGCTGCTCGACCAAGCGCGAGGAAATCCGAAGTGGGTTTTAAAGAATCGAGAAGACAGAGGAGGGACAAGGAGAAGGAGGAGAATGAAGGGAAGAAGAAGAAGATTTCGAAGCTGAAGAATGAACCAAGAAGAGGGTCTGTTTCGACGCGTAGGGAGAATTATGAGTACAGAAGTGGTGGTTCTGGAAGTTCGAGCTCGAGAATGGGAAAGGTAGCATTTGTGGAAGCCAGATTTGGAAAAAGGGTCAGAAGCAAGAAGTCATTGAAGAAGATGCAGAAGAATGAATGTTGCTCTGAAAATCTCAGTCCAGTTTCAGTTTTGGATATTCAAGACGACGACGACTTTACGTTCCCGAGAGAAACTAATTTCACAGGTTTGGATTCTCGAATTCATAGTGCTTTACTGGACAAAATCAGATTTTCATTGCAAATTTTTCTTTTAAACCGAAAACGACTTTAA	1308	0.487	MTEWRPRTKKSRKSVQRGRERAEIPKVGTTRWSMSEAQKLKGEGKVSKFGISFSFVSKRQRIFYTYLPLPPFLVPLCLVAYHTSQSQHIPVLLLVQQSSSSTSISSHFPLGCVWKIGIMADQQDLAKSGCFSRFVRVLLCAHSNNAPPIHPSDRLPQPPPSQTLSSHPNKPPFAPTPVPATPGVVAKLMGLDSLPNTSRGSKGVSPHSVPRSRSVNFVDYLLQFDPTHQEGTHRRVRTSSSFREVPASSSSLTALSFQQQKKNHEVVVFFWDENDASRSKSSEAARPSARKSEVGFKESRRQRRDKEKEENEGKKKKISKLKNEPRRGSVSTRRENYEYRSGGSGSSSSRMGKVAFVEARFGKRVRSKKSLKKMQKNECCSENLSPVSVLDIQDDDDFTFPRETNFTGLDSRIHSALLDKIRFSLQIFLLNRKRL	435

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere12g0175	435	MobiDBLite	consensus disorder prediction	279	350	-	-
	Dere12g0175	435	MobiDBLite	consensus disorder prediction	194	210	-	-
	Dere12g0175	435	MobiDBLite	consensus disorder prediction	1	22	-	-
	Dere12g0175	435	MobiDBLite	consensus disorder prediction	241	257	-	-
	Dere12g0175	435	MobiDBLite	consensus disorder prediction	148	181	-	-
	Dere12g0175	435	Pfam	DUF761-associated sequence motif	181	199	IPR032795	-
	Dere12g0175	435	Coils	Coil	304	324	-	-
	Dere12g0175	435	MobiDBLite	consensus disorder prediction	151	179	-	-
	Dere12g0175	435	MobiDBLite	consensus disorder prediction	279	334	-	-
	Dere12g0175	435	MobiDBLite	consensus disorder prediction	335	350	-	-
	Dere12g0175	435	PANTHER	OS05G0128300 PROTEIN	125	398	-	-
	Dere12g0175	435	MobiDBLite	consensus disorder prediction	191	210	-	-
	Dere12g0175	435	MobiDBLite	consensus disorder prediction	228	257	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere12g0175	Dere-ChrDere12	2976928	2979584	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere12g0175	127	417	TRM (TON1 Recruiting Motif) Superfamily	AT5G01370	29.042	1.02e-13	70.9