Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0143 ATGGATAAGGCGTGTCTGGCTATTGCTTCCACAGGCAAAATTATGTTTGATCAATTCACTGAGCTTGTAAATGACTTGTACAATAATGGGTTGTTGTCAATTCTCTCACCTTCTAGAAACCAAAGTTTGGATTATGATTTTAAGGAGTTTGATCTCTCAGTTGTTCATCCTTCAAGGCATAATCTTTCATCACAAGTGGAAGACAAAGGAGCATGCAAGAAGAGCAAGTGTAGTGAAAGTATCCTCATGGGCCAAACAAAAACTCTGTCAAGTTGA 276 0.3841 MDKACLAIASTGKIMFDQFTELVNDLYNNGLLSILSPSRNQSLDYDFKEFDLSVVHPSRHNLSSQVEDKGACKKSKCSESILMGQTKTLSS 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0143 91 PANTHER HISTIDINE AMMONIA-LYASE 1 52 IPR001106 -
Dere12g0143 91 Gene3D Fumarase/aspartase (Central domain) 1 56 - -
Dere12g0143 91 SUPERFAMILY L-aspartase-like 1 54 IPR008948 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0143 Dere-ChrDere12 1710593 1711150 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0143 1 54 Monolignol Biosynthesis Gene Families AT3G10340 62.963 7.82e-16 68.9