Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0132 ATGAAAAGGCATCAATCTTTTTCCCTTTATAAAGGGTCTTGTGAGTGGGAGAAAAATAGAGAAGAGAGAAGAAAAAAAAGCAGAGCAATGGCTGAGTTAGGGAAGAAGGGATGCATTAAAACTAGTAAAGGGCCATGGATAGTTAGAAAAATCACCAAAGATGGTGTTATCACGCAGTATAATCGATTTCCAAGTGATCGTGAGAGACAAAACAATAAGCTCAGAGAAAGAAAGCGAAGATCAATAACTCGAAAAATATTTGCTGGTTTGAAAGCTCATGGAAACTACAATCTTCCTAAACATTCTGATACTAATGACTTACTTAGAGCTTTATGTGAAGAAGCTGGGTGGCATGTTGCAGAAGATGGCACTATTTATAAGAAGTCGCAAGCAAGGAAGAAGCGAGCAGAGGCGAGGCGCATCTCCCTCGCTCAGTCAAAATTGCTCTGA 450 0.3978 MKRHQSFSLYKGSCEWEKNREERRKKSRAMAELGKKGCIKTSKGPWIVRKITKDGVITQYNRFPSDRERQNNKLRERKRRSITRKIFAGLKAHGNYNLPKHSDTNDLLRALCEEAGWHVAEDGTIYKKSQARKKRAEARRISLAQSKLL 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0132 149 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 59 131 IPR033264 GO:0003700|GO:0006351|GO:0009742
Dere12g0132 149 Pfam BES1/BZR1 plant transcription factor, N-terminal 61 139 IPR008540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0132 Dere-ChrDere12 1617362 1620473 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0132 81 128 BZR Transcription Factor Family AT1G19350 62.500 1.98e-17 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Dere12g0132 BES1_N 7.3e-35 No_clan