Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0131 ATGTCTAGGTCAGTCTCGATCTCAATCCCTCGCGCCTCCCCCTTCCGTCGTACCTCCGCTCTTCCTCCTCCGGCGTCCTCTTCAGACCAGAAGCAACAAGCTAACCTCACAGTCGCCGTCACAGTGCGTGGAGTAGTCCTGATTTTCCTGCAGATACCTGGGTCTCCTGAAACTGGTATGAGTAAGGAGGACCTTGTGTGGCAAAAAAGACAGGTGAGGGCAGGAGATGATGTAGGTTGGGGAGAGAAGATGAAGCAGGTGGTAGGAACGGTGGTGTCAAACAAGATGCAGAAATCAGTGGTGGTGGCAGTTGATAGATTATTCCACAACAAATTATACAACCGTTATATCAAACGCACCTCTAAATTTATGGCGCATGACGAGAACAATGTTTGTAACATTGGTGACCGAGTTCGATTGGATCCTTCTAGGCCTCTGAGCAAGCGTAAGCATTGGGTTGTTGCTGAAATTCTTAAGAAAGCACGAATATATGTTCCACCATCTGCACCTGTGACTGATAATCCAAGCTCCAGCTCTCAAGCACCTGCTTCCTAA 555 0.4847 MSRSVSISIPRASPFRRTSALPPPASSSDQKQQANLTVAVTVRGVVLIFLQIPGSPETGMSKEDLVWQKRQVRAGDDVGWGEKMKQVVGTVVSNKMQKSVVVAVDRLFHNKLYNRYIKRTSKFMAHDENNVCNIGDRVRLDPSRPLSKRKHWVVAEILKKARIYVPPSAPVTDNPSSSSQAPAS 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0131 184 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 83 163 IPR000266 GO:0003735|GO:0005840|GO:0006412
Dere12g0131 184 Gene3D - 67 162 IPR012340 -
Dere12g0131 184 Hamap 30S ribosomal protein S17 [rpsQ]. 84 159 IPR019984 GO:0003735|GO:0005840|GO:0006412
Dere12g0131 184 MobiDBLite consensus disorder prediction 1 33 - -
Dere12g0131 184 PRINTS Ribosomal protein S17 family signature 103 126 IPR000266 GO:0003735|GO:0005840|GO:0006412
Dere12g0131 184 PRINTS Ribosomal protein S17 family signature 145 152 IPR000266 GO:0003735|GO:0005840|GO:0006412
Dere12g0131 184 PRINTS Ribosomal protein S17 family signature 135 145 IPR000266 GO:0003735|GO:0005840|GO:0006412
Dere12g0131 184 SUPERFAMILY Nucleic acid-binding proteins 84 169 IPR012340 -
Dere12g0131 184 Pfam Ribosomal protein S17 89 156 IPR000266 GO:0003735|GO:0005840|GO:0006412
Dere12g0131 184 FunFam 30S ribosomal protein S17 84 183 - -
Dere12g0131 184 NCBIfam 30S ribosomal protein S17 85 154 IPR019984 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0131 89 158 Cytoplasmic Ribosomal Protein Gene Family AT4G30800 39.437 6.02e-06 42.7