Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0130 ATGAACAATCTTCGCCTCTTCTTCCTTCTCCTCTTTCTCTTCTTCTTCTTGGGTTTGCCTAATTCTTCTCTTTCTCTCTCCTCTGACGGCCTTGCCCTTCTCTCTCTTAAATCCGCCATTGATCAGCCTCCTGGAGCCGAGGCTTTCTCCGACTGGAACGACGGCGACCCCACTCCTTGCCAATGGTCCGGCATTTCCTGCATGAACGTATCCGGATCCTCGGAGCCTCGCGTCGTTGGAATCGCCCTCTCTGGTAAGAATCTCCGAGGGTATGTACCTTCTGAGCTCGGAAGCTTGGTGTATCTTCGTCGACTCAATTTACATAGCAACAATTTCTATGGCTTTATTCCTGTTCAGCTCTTCAATGCCACTTCGCTTCATAGTCTTTTTCTCTACGGTAACAATCTTTCCGGTCCATTACCTCCTTCGATCTGCAACATCCCGCGGCTTCAAAACCTCGATCTCTCCAATAACTCCCTCTCGGGTCATATCCCTGGGGAACTCAAGAATTGCAAACAGTTGCAGAGACTGATTCTCGCTCGGAACAAGTTTTCTGGCGAGATACCTAAAGGTGTGTGGTCGGAATTGGATAATTTGGTTCAGCTGGACCTTTCTGCGAATGAGCTGGACGGGTCGATTCCGGAAGATATTGGCGAACTGAAGTCTCTAACCGGTACGCTTAATCTTTCCTTCAATCATTTGTCTGGTAGAGTTCCCAAGTCGCTGGGGAATTTGCCTGTTACAGTGAGTTTCGATCTTCGTAATAACAATCTAAGCGGCGAGATACCCCAAACGGGGTCGTTCGCTAACCAGGGACCTACAGCATTTCTGAACAATCCGCAACTATGCGGATTTCCCCTCCAGAAAACTTGCGGTAATTCGGGCCAGGGTTCGCCGGAGAGTCCAAGTTCATCTCCGGAGTCCGATAACCGTTCGACGAAAGGCCTAAGTCCAGGTTTGATCATACTAATCTCAGCGGCTGACGCAGCTGGGGTTGCGTTAATTGGCCTTGTGGCTGTGTACATTTATTGGAAAAAGAAGGACCATTCCAATGGATGCAGCTGCACAGGGAAGAGCAAGTTTGGCGGGAATGAGAAAGGGCATATTTGTTCCTTACCATGTATCAATGGTCTGAAAAGTGATGACTCTGAAATGGAGGAACCTGAAAAGGCAGAGGGGAGCAGAGGGGAAGGGGATTTGGTGGCCATTGATAAGGGTTTCAACTTCGAGCTTGATGAACTTCTCAGGGCTTCGGCTTATGTATTGGGGAAGAGTGGATTGGGGATTGTGTATAAAGTGGTTCTGGGCAATGGGGTGCCTGTGGCTGTGAGAAGACTTGGAGAGGGTGGTGAACAGAGATACAAGGAGTTTGCGGCTGAGGTTCAGGCCATTGGGAAAGTGAAGCATCCTAACATTGTGAGGTTGAGAGCTTATTATTGGGCTCCAGACGAAAAGCTTCTGATTAGTGATTTCATCTCCAATGGCAATTTGGCCAATGCTCTTCGAGGCAGAAATGGCCAACCATCTCCGAACCTTTCATGGTCAACCAGGGTAAGAATTGCCAAAGGAACAGCGAGGGGCTTGGCCTATCTCCATGAATGCAGTCCAAGAAAGTTTGTTCATGGTGACATCAAACCCTCCAATATCCTACTCGACAATGACTTTCACCCCTACATCTCTGACTTCGGCCTCAACCGCCTCATTACTATCACTGGAAACAACCCCTCCTCTGGCGGCTTCATGGGCGGAGCTCTTCCCCACATGAAGCCTTCTCAAACAGAGCGAACCAACAATTACAAAGCCCCTGAGGCTCGAGTCCCTGGCTGCAGACCAACCCAGAAATGGGACGCCTATTCATTCGGAGTTGTATTGCTTGAACTTCTTACTGGGAAATCTCCAGAGGCGTCTCCTACAACATCAACTTCTATGGAAGTTCCTGACCTAGTGAGGTGGGTGAAAAAGGGCTTTGAAGAAGAAAGCCCTTTATCAGAAATGGTTGACCCATCGCTGCTTCAAGAAGTGCATGCCAAGAAAGAGGTTCTGGCTGTGTTTCATGTAGCACTAGCTTGCACTGAGGGAGACCCTGATGTTCGGCCTAGAATGAAATCTGTCTCTGAAAATCTTGAAAGAATTGGAACGTGA 2142 0.4869 MNNLRLFFLLLFLFFFLGLPNSSLSLSSDGLALLSLKSAIDQPPGAEAFSDWNDGDPTPCQWSGISCMNVSGSSEPRVVGIALSGKNLRGYVPSELGSLVYLRRLNLHSNNFYGFIPVQLFNATSLHSLFLYGNNLSGPLPPSICNIPRLQNLDLSNNSLSGHIPGELKNCKQLQRLILARNKFSGEIPKGVWSELDNLVQLDLSANELDGSIPEDIGELKSLTGTLNLSFNHLSGRVPKSLGNLPVTVSFDLRNNNLSGEIPQTGSFANQGPTAFLNNPQLCGFPLQKTCGNSGQGSPESPSSSPESDNRSTKGLSPGLIILISAADAAGVALIGLVAVYIYWKKKDHSNGCSCTGKSKFGGNEKGHICSLPCINGLKSDDSEMEEPEKAEGSRGEGDLVAIDKGFNFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFAAEVQAIGKVKHPNIVRLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSPNLSWSTRVRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFHPYISDFGLNRLITITGNNPSSGGFMGGALPHMKPSQTERTNNYKAPEARVPGCRPTQKWDAYSFGVVLLELLTGKSPEASPTTSTSMEVPDLVRWVKKGFEEESPLSEMVDPSLLQEVHAKKEVLAVFHVALACTEGDPDVRPRMKSVSENLERIGT 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0130 713 SUPERFAMILY L domain-like 27 288 - -
Dere12g0130 713 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Dere12g0130 713 SMART serkin_6 420 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g0130 713 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 26 194 - -
Dere12g0130 713 FunFam Os07g0541700 protein 499 578 - -
Dere12g0130 713 PRINTS Leucine-rich repeat signature 196 209 - -
Dere12g0130 713 PRINTS Leucine-rich repeat signature 150 163 - -
Dere12g0130 713 Gene3D Phosphorylase Kinase; domain 1 404 491 - -
Dere12g0130 713 FunFam Leucine-rich repeat receptor-like protein kinase 198 293 - -
Dere12g0130 713 ProSiteProfiles Protein kinase domain profile. 416 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g0130 713 SUPERFAMILY Protein kinase-like (PK-like) 421 708 IPR011009 -
Dere12g0130 713 Pfam Protein kinase domain 421 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g0130 713 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 169 711 IPR046959 -
Dere12g0130 713 CDD STKc_IRAK 422 711 - -
Dere12g0130 713 Gene3D Ribonuclease Inhibitor 26 192 IPR032675 -
Dere12g0130 713 Gene3D Ribonuclease Inhibitor 193 293 IPR032675 -
Dere12g0130 713 Gene3D Transferase(Phosphotransferase) domain 1 492 711 - -
Dere12g0130 713 ProSitePatterns Serine/Threonine protein kinases active-site signature. 539 551 IPR008271 GO:0004672|GO:0006468
Dere12g0130 713 FunFam Leucine-rich repeat receptor-like protein kinase 399 491 - -
Dere12g0130 713 MobiDBLite consensus disorder prediction 291 313 - -
Dere12g0130 713 Pfam Leucine rich repeat 148 209 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0130 Dere-ChrDere12 1599274 1603428 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0130 23 711 Receptor kinase-like Gene Family AT1G67510 73.050 0.0 1025
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dere12g0130 Pkinase 1.8e-32 CL0016