Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0127 ATGGGAAACAGTAATCGGTATGTCGAAATTTCTCCCCCAAACCCACCGTATTTTCGGTTCTCCGATGACAATGAAGTGGCTAAATGTTGCTTCGTAAGACCCATTGCTCGTTTCTTCGTCTTATTCGTCCTGGTTCTTCAAGCTCTGGCATTAACATTTCAACCAGTCTCGGGAGGCCATTTGTGGGATGGGGTGATTGTGACGCAGGCTGATTATCAATCTCTGCAAGCTATAAAGCACGAATTGATAGATTCCAAAGGAGTTCTGAGGAGCTGGAATGACAGTGGTATTGGAGCTTGCTCTGGTGGGTGGGCAGGAATTAAGTGCGTGAAAGGACAGGTCATTGCAATCCAGCTTCCATGGAAGGGATTGGGGGGTCGAATTTCAGAGAAAATCGGACAGTTGCAATCTCTTAGGAAGCTGAGTCTACACGATAATTTACTAGGAGGTCCTGTCCCTTGGTCTCTTGGCTTCCTTCCTAATCTCAGAGGACTCTATCTCTTTAACAATAGGCTTTCGGGCTCTGTTACTCCTTCCATTGGTAATAGCCCAATGCTGCAGTCTCTTGACATCAGCAATAATTCACTCACAGGTACTATCCCTCCTAGCTTAGCAAACTCCACAAGATTATATAGACTCAATTTGAGCTTTAACTCTCTTTCTGGATCCATTCCTATTAGTTTGACTGTGTCTTCTTCTTTAACTATTCTTGCTCTTCAACACAACAATCTTTCTGGTTCTATCCCAGATTCTTGGGGTACTAGAATGGGAAAAAACAAAACTTCCCAACTTCAAATCTTGACGCTTGATCACAATCTCATTTCTGGTACCATTCCTGTTTCTTTAAGTAAGATGGGTGTGCTTCAAGAGATTTCTTTGAGCCATAATCAGATTGTGGGGTCTATTCCAAGTGAGCTAGGTGGGCTTTCAAGGCTTCAAATTCTTGATCTATCAAACAATGCCATCAATGGTAGCTTTCCACATACCTTCGATCAGTTAAAAAACCTTACTGTGCTTAACTTGAAGAACAATAAGCTTGGGGGTGAAATCCCATCAACAATTGGCAACATCTCGGGCATCACCCAGATTGATTTCTCTGAAAATAAACTTGTGGGAGAGATTCCCGATTCACTTACCAAACTTGCAAATCTGAGTTCTTTTAATGTTTCTTACAACAATCTGTCTGGCCTTGTCCCATCCCTCCTTTCCAAAAGATTCAATTCTAGCTCTTTTGCCGGGAATCTTCAGCTTTGTGGGTATATCTCTTCAAAACCATGCCCTTCTTCTTCACCCCCACCTCAGAGTCCTCCGTCTCCATCCCCACAACCTTCTTTGAAGCCACATCACCGTAAACTAAGCACCAAGGACATAATCCTCATAGTAGCTGGTGCTCTTCTTGTGATTCTTCTTCTACTTTGCTGCTTTTTGCTTTGTTGCTTGATCAGGAAAAGGCCTGCCTCCAAAGAAAAGAACGGCAAAAAAGCCAAAACATCCACTACTACTGCTGCTACTGCTAGAAGTGTAGAAAAAGGTGGTGAAGTTGAATCAGGAGGTGAAGCAGGAGGGAAACTAGTTCACTTTGATGGGCCATTTGTGTTTACAGCTGATGATCTCTTGTGTGCCACTGCTGAGATAATGGGGAAAAGTGCTTATGGAACAGCATACAAGGCAACACTAGAGGATGGGAACCAAGTTGCTGTGAAGAGGTTAAGGGAGAAGACAACTAAGGGGCAGAAGGAGTTTGAAACAGAGGTTGCCGCACTTGGCAAAATTAGACACCCAAATCTCTTGGCACTTAGAGCATACTACTTGGGACCAAAAGGAGAGAAGCTTCTGGTCTTTGATTACATGACCAAAGGAAGTCTAGCATCATTCCTTCATGCTAGGGGCCCCGAAATTGTCATCGACTGGCCAACAAGAATGAGAATAGCCCTTGGAGTGACACGTGGCCTATGTTACCTCCACACCCAGGAGAACATAGTACATGGGAATCTCACCTCTAGCAACATACTCTTGGATGAGCAGACAAATGCCCATATCACAGACTTTGGCCTCTCAAGGCTCATGACCACATCAGCAAACACCAACATCATAGCCACTGCAGGAAGCCTTGGCTATAATGCACCAGAGCTCACAAAGACCAAGAAACCAAACACGAAAACTGATGCATATAGCCTTGGTGTAATCATGTTGGAGCTCCTAACTGGAAAACCACCTGGTGAACCAACCAATGGCTTGGATTTGCCTCAGTGGGTGGCATCCATAGTGAAGGAAGAATGGACCAATGAAGTGTTTGATTTGGAGCTCATGAGGGATGCACCAACTATTGGTGATGAGCTGCTTAATACACTGAAATTGGCTCTTCATTGTGTGGATCCATCTCCAGCAGCTAGGCCTGAAGTTCAGCAGATTCTTCAGCAATTGGAGGAGATCAAGCCAGACTTAGCTTCTGCTACTTCAGTGGATGATGGAGCTAAAGTTCCAGAAACTGAATAA 2496 0.4423 MGNSNRYVEISPPNPPYFRFSDDNEVAKCCFVRPIARFFVLFVLVLQALALTFQPVSGGHLWDGVIVTQADYQSLQAIKHELIDSKGVLRSWNDSGIGACSGGWAGIKCVKGQVIAIQLPWKGLGGRISEKIGQLQSLRKLSLHDNLLGGPVPWSLGFLPNLRGLYLFNNRLSGSVTPSIGNSPMLQSLDISNNSLTGTIPPSLANSTRLYRLNLSFNSLSGSIPISLTVSSSLTILALQHNNLSGSIPDSWGTRMGKNKTSQLQILTLDHNLISGTIPVSLSKMGVLQEISLSHNQIVGSIPSELGGLSRLQILDLSNNAINGSFPHTFDQLKNLTVLNLKNNKLGGEIPSTIGNISGITQIDFSENKLVGEIPDSLTKLANLSSFNVSYNNLSGLVPSLLSKRFNSSSFAGNLQLCGYISSKPCPSSSPPPQSPPSPSPQPSLKPHHRKLSTKDIILIVAGALLVILLLLCCFLLCCLIRKRPASKEKNGKKAKTSTTTAATARSVEKGGEVESGGEAGGKLVHFDGPFVFTADDLLCATAEIMGKSAYGTAYKATLEDGNQVAVKRLREKTTKGQKEFETEVAALGKIRHPNLLALRAYYLGPKGEKLLVFDYMTKGSLASFLHARGPEIVIDWPTRMRIALGVTRGLCYLHTQENIVHGNLTSSNILLDEQTNAHITDFGLSRLMTTSANTNIIATAGSLGYNAPELTKTKKPNTKTDAYSLGVIMLELLTGKPPGEPTNGLDLPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPAARPEVQQILQQLEEIKPDLASATSVDDGAKVPETE 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0127 831 Gene3D Transferase(Phosphotransferase) domain 1 618 825 - -
Dere12g0127 831 MobiDBLite consensus disorder prediction 489 516 - -
Dere12g0127 831 Pfam Leucine rich repeat 307 346 IPR001611 GO:0005515
Dere12g0127 831 SUPERFAMILY L domain-like 108 407 - -
Dere12g0127 831 CDD STKc_IRAK 546 811 - -
Dere12g0127 831 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 182 256 - -
Dere12g0127 831 SUPERFAMILY Protein kinase-like (PK-like) 544 815 IPR011009 -
Dere12g0127 831 SMART LRR_typ_2 285 308 IPR003591 -
Dere12g0127 831 SMART LRR_typ_2 333 357 IPR003591 -
Dere12g0127 831 SMART LRR_typ_2 381 404 IPR003591 -
Dere12g0127 831 SMART LRR_typ_2 309 332 IPR003591 -
Dere12g0127 831 SMART LRR_typ_2 159 183 IPR003591 -
Dere12g0127 831 Gene3D Ribonuclease Inhibitor 68 229 IPR032675 -
Dere12g0127 831 Pfam Protein tyrosine and serine/threonine kinase 544 808 IPR001245 GO:0004672|GO:0006468
Dere12g0127 831 MobiDBLite consensus disorder prediction 425 448 - -
Dere12g0127 831 Gene3D Phosphorylase Kinase; domain 1 546 617 - -
Dere12g0127 831 ProSiteProfiles Protein kinase domain profile. 540 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g0127 831 MobiDBLite consensus disorder prediction 426 444 - -
Dere12g0127 831 PRINTS Leucine-rich repeat signature 309 322 - -
Dere12g0127 831 PRINTS Leucine-rich repeat signature 186 199 - -
Dere12g0127 831 Gene3D Ribonuclease Inhibitor 230 327 IPR032675 -
Dere12g0127 831 Pfam Leucine rich repeat N-terminal domain 70 109 IPR013210 -
Dere12g0127 831 FunFam Pollen receptor-like kinase 1 617 821 - -
Dere12g0127 831 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 262 811 - -
Dere12g0127 831 FunFam Leucine-rich repeat receptor-like kinase 71 181 - -
Dere12g0127 831 Gene3D Ribonuclease Inhibitor 328 429 IPR032675 -
Dere12g0127 831 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 257 430 - -
Dere12g0127 831 Pfam Leucine Rich Repeat 186 205 IPR001611 GO:0005515
Dere12g0127 831 FunFam Leucine-rich repeat receptor-like protein kinase 526 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0127 Dere-ChrDere12 1583184 1586102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0127 60 813 Receptor kinase-like Gene Family AT3G51740 67.734 0.0 1010
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dere12g0127 PK_Tyr_Ser-Thr 3.1e-40 CL0016