Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0118 ATGGCCAAAGACATAACTCCAATTCAAATAGGGTTGATTCTTGATTTGAATTCGCCCCTCGGAACTATGGCACAGAGTTGCATAAGTTTGGGAGTTATGGGTTTCTATGACCGCAATGCTCACTATGCAACTAGGATTGCGCTTCAAATGAGGGATTCTCACAATGATATTGTGACGGCAGCATCTGGAGCTTTGGATCAAATGAAGAATGAAAAGGAGCACACAATTATAGGACCCCAAAATTCAGCACAAGCGAGGTTTGTAGTTGAACTTGGAACCAAAGCTAAAAGGAACAATTACTCTTTGGGATATCAAAGGAATTCATTCGTGAAAGAGCTTCTCATTGAACATTTAGGACTAGAAGAGTCGCAGTTGAAGGCTTATGACACTCTTGAAGATTATCACCAAGCACTGTCACGTGGAATTGAAAATGGAGGTCTAATCTCTCACATTTCTGTTGCAATCTTGAATGTCACTCAAGATATACAAAAACTTGAAAGCATTAAGAAGAAGTACTCCATAAGCAGTGGCATCATCCCATCTAAATAG 549 0.3989 MAKDITPIQIGLILDLNSPLGTMAQSCISLGVMGFYDRNAHYATRIALQMRDSHNDIVTAASGALDQMKNEKEHTIIGPQNSAQARFVVELGTKAKRNNYSLGYQRNSFVKELLIEHLGLEESQLKAYDTLEDYHQALSRGIENGGLISHISVAILNVTQDIQKLESIKKKYSISSGIIPSK 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0118 182 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Dere12g0118 182 SUPERFAMILY Periplasmic binding protein-like I 7 101 IPR028082 -
Dere12g0118 182 PANTHER OS06G0188250 PROTEIN 5 96 - -
Dere12g0118 182 Gene3D - 2 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0118 Dere-ChrDere12 1477478 1478910 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0118 6 96 Ion Channels AT2G29120 39.560 2.64e-19 82.8